Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucalyptus_20camaldulensis_20[genbank_20GCA_5F000260855.1_202012-01- 23] 274,001 sequences; 654,922,307 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq231953 100 6e-19 seq111902 100 6e-19 seq170739 96.9 7e-18 seq121024 91.5 3e-16 seq205789 86.0 1e-14 >seq231953 Length=671 Score = 100 bits (110), Expect = 6e-19 Identities = 91/115 (79%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 211 AGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTC 270 |||||||||||| || || | ||||| || | | || | ||| ||||||||||||||| Sbjct 115 AGTGCAAAGGCAGAAAGGAGCTTGACAGCAAGATCCACCCGTCGAGCAGGGACGAAAGTT 56 Query 271 GGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAG 325 || |||| | || | |||||| || || || ||||||||||| ||||||||||| Sbjct 55 GGCCTTAGTAATTTGACGGTGCCGAGTGAAAGGGCCGTCGCTCAACGGATAAAAG 1 >seq111902 Length=21087 Score = 100 bits (110), Expect = 6e-19 Identities = 133/178 (75%), Gaps = 5/178 (3%) Strand=Plus/Minus Query 150 CTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTC-AGCTTGGATGGAAACCATGCGC 208 |||||||| |||| ||||||| ||||| | || |||||| || || | || | Sbjct 7547 CTCCCAAAAGGTAATGGAGGCGTGCAAAGGTTTTGTCGAGCTTG-ATAGAGATTG-GCCC 7490 Query 209 AC-AGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAA 267 | |||||||||||| ||||| | |||| ||| | |||| | ||| |||| |||| ||| Sbjct 7489 TCGAGTGCAAAGGCAGAAGGGAGCTTGATTGCAAGACCCACCCGTCGAGCAAGGAC-AAA 7431 Query 268 GTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAG 325 || || |||| ||||||| | ||| || ||||| ||| || |||| ||||||||||| Sbjct 7430 GTTGGCCTTAGTGATCCGACAATGCCGAGTGGAAGGGCAGTTGCTCAACGGATAAAAG 7373 >seq170739 Length=4274 Score = 96.9 bits (106), Expect = 7e-18 Identities = 91/115 (79%), Gaps = 1/115 (1%) Strand=Plus/Minus Query 211 AGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTC 270 |||||||||||| ||||| | |||| ||| | |||| | ||| |||| |||| ||||| Sbjct 2768 AGTGCAAAGGCAGAAGGGAGCTTGATTGCAAGACCCACTCGTCGAGCAAGGAC-AAAGTT 2710 Query 271 GGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAG 325 || |||| ||||||| | ||| || ||||| ||| || |||| ||||||||||| Sbjct 2709 GGCCTTAGTGATCCGACAATGCCGAGTGGAAGGGCAGTTGCTCAACGGATAAAAG 2655 >seq121024 Length=45741 Score = 91.5 bits (100), Expect = 3e-16 Identities = 73/88 (83%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 218 AGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTA 277 ||||| ||||| | |||||||| | |||| | ||| |||||||||||||||||| |||| Sbjct 41700 AGGCAGAAGGGAGCTTGACTGCAAGACCCACCCGTCGAGCAGGGACGAAAGTCGGCCTTA 41759 Query 278 ATGATCCGGCGGTGCTGAATGGAACGGC 305 ||||||| |||||| || ||||| ||| Sbjct 41760 GTGATCCGACGGTGCCGAGTGGAAGGGC 41787 >seq205789 Length=981 Score = 86.0 bits (94), Expect = 1e-14 Identities = 97/129 (75%), Gaps = 1/129 (1%) Strand=Plus/Plus Query 211 AGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTC 270 |||||||||||| ||||| | |||||||| | ||| | || ||||||||| ||||| Sbjct 359 AGTGCAAAGGCAGAAGGGAGCTTGACTGCAAGACCTACCCGTTGAGCAGGGAC-TAAGTC 417 Query 271 GGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACC 330 || |||| |||| | || | | ||||| ||| ||||||| || ||||||||| || Sbjct 418 GGCCTTAGTGATTTGATGGCGTCAAGTGGAAGGGCTGTCGCTCAACAGATAAAAGCCACT 477 Query 331 CTGGGGATA 339 || | |||| Sbjct 478 CTAGAGATA 486 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 979708214176