Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucalyptus_20camaldulensis_20[genbank_20GCA_5F000260855.1_202012-01- 23] 274,001 sequences; 654,922,307 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq105331 75.2 1e-11 seq238871 73.4 4e-11 seq238870 73.4 4e-11 >seq105331 Length=6188 Score = 75.2 bits (82), Expect = 1e-11 Identities = 53/61 (87%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 |||||| |||||||||||||||||||| ||||||||||||| ||| ||||||| ||| Sbjct 204 TACACCTTTCGTGCAGGTCGGAACTTATATGACAAGGAATTTCACTAATTTAGGACTGTT 145 Query 173 A 173 | Sbjct 144 A 144 >seq238871 Length=1761 Score = 73.4 bits (80), Expect = 4e-11 Identities = 52/60 (87%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 ||| || ||| ||| |||| ||||||||| ||||||||||||||||||||| ||| |||| Sbjct 856 TACGCCTTTCATGCGGGTCAGAACTTACCTGACAAGGAATTTCGCTACCTTTGGATCGTT 797 >seq238870 Length=2307 Score = 73.4 bits (80), Expect = 4e-11 Identities = 52/60 (87%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 ||| || ||| ||| |||| ||||||||| ||||||||||||||||||||| ||| |||| Sbjct 2287 TACGCCTTTCATGCGGGTCAGAACTTACCTGACAAGGAATTTCGCTACCTTTGGATCGTT 2228 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 545747520699