Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucalyptus_20camaldulensis_20[genbank_20GCA_5F000260855.1_202012-01- 23] 274,001 sequences; 654,922,307 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq138279 228 3e-57 seq163405 150 7e-34 seq97334 136 1e-29 seq133955 123 9e-26 seq221503 116 1e-23 seq112647 116 1e-23 seq24780 100 1e-18 seq37916 96.9 1e-17 seq105330 95.1 4e-17 seq106386 93.3 2e-16 seq238853 86.0 2e-14 seq100106 86.0 2e-14 seq99460 82.4 3e-13 seq56803 80.6 1e-12 >seq138279 Length=1048 Score = 228 bits (252), Expect = 3e-57 Identities = 339/471 (72%), Gaps = 26/471 (6%) Strand=Plus/Plus Query 137 GCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCAC 196 ||||| ||| || |||||||||||||||||||||| | | ||| || |||| |||||| Sbjct 472 GCTGCGCCTCAACGCATTTCGGGGAGAACCAGCTAGCTCTTGGTTCGAGTGGCATTTCAC 531 Query 197 CCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGT 256 ||||| ||||| ||||| || | | |||||| | ||| |||| ||||||| || Sbjct 532 CCCTAACCACAACTCATCTGCTGATTCTTCAACATCAGTCGGTTTAAACCTCCACTTAGT 591 Query 257 CTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTCT-TGATC-GTG 314 | |||| |||||| | || |||||||||||||| | || ||||| | | | || Sbjct 592 TTCACCCAAGCTTCATCTTGGTCATGGATAGATCACCCAGGTTTGGGTCCATAAGCAGTA 651 Query 315 CCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCCACACGGGTT-----A 369 || || | |||||| ||||||||||| |||||||| ||||| | Sbjct 652 ACA---ATTC-CCCTATGAAGACTCGCTTTCACTACGGCTTTGGT----GGGTTCCCTTA 703 Query 370 ACCTCGCGACACAACGCAA-ACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGG 428 ||| || ||| || | | |||| |||||||||||||| |||||||| |||| | Sbjct 704 ACCAAGC--CACTACCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGA--G 759 Query 429 TACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCA 488 | |||| || | | |||| || | ||| || | ||||||| || |||||||| Sbjct 760 T-CCTAGTAGTCTC-----CTCCCACTGCTTGGGAGCTTACGGTTTCATGTTCTATTTCA 813 Query 489 CTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCA 548 ||||||| ||||| ||||||||| ||||||||||||||| | |||||| ||||||| Sbjct 814 CTCCCCGATGGGGGTTCTTTTCACCCTTCCCTCACGGTACTACTTCGCTATGGGTCACCC 873 Query 549 AGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACACGAAATTTCA 599 |||||||||||| ||| |||||||| | |||||||||| ||| || Sbjct 874 AGGAGTATTTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCA 924 >seq163405 Length=6639 Score = 150 bits (166), Expect = 7e-34 Identities = 302/440 (69%), Gaps = 27/440 (6%) Strand=Plus/Minus Query 158 GGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCC 217 ||||||| |||||| | | | |||||| |||| |||||||| || ||||| ||||| | Sbjct 4365 GGGAGAATCAGCTAGCTCTAGGTTTGAGTGGCATTTCACCCGTAACCACAATTCATCTAC 4306 Query 218 TCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGC 277 | | | |||||| | | | |||| | ||||||| || | |||| |||||| | || Sbjct 4305 TGATTCTTCAACATCAATCGGTTTAGACCTCCACTTAGTTTCACCCAAGCTTCATCTTGG 4246 Query 278 CCATGGATAGATCACTTCGCTTCGGGT-CTTGATC-GTGCCACTCATACGCCCTATTCGG 335 |||||||||||||| | | || |||| | | | | ||| || | |||| || | Sbjct 4245 TCATGGATAGATCACCTAGGTTTGGGTCCATAAGCAGTGACAAT----TGCCCCATGAAG 4190 Query 336 ACTCGCTTTCGCTACGGCTACCCCACACGGGTT-----AACCTCGCGACACAACGCA-AA 389 |||||||||| |||| ||| ||| | ||||| |||| || | | || | | Sbjct 4189 ACTCGCTTTCACTACAGCT---CCA-ATGGGTTCCCTCAACCAGGC--CGCTACTTATGA 4136 Query 390 CTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCT 449 |||| ||||||||||| | ||||| || ||| | ||| || || || Sbjct 4135 GTCGCCAGCTCATTCTTCCATAGGCATGCGATCA----GAGTCTATTAG-----TCTCCT 4085 Query 450 CCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTT 509 || || ||| || | ||||||| || |||||||||||||| | || ||||| Sbjct 4084 CCCACTACTTGGGAGCTTACGGTTTCATGTTTTATTTCACTCCCCGATGGCAGTTCTTTT 4025 Query 510 CACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGG 569 |||| |||||||| |||||| | | ||| | ||||| |||||||||||| ||| | Sbjct 4024 CACCCTTCCCTCATGGTACTACTTCATTATGGATCACCCAGGAGTATTTAGCCTTGCAAG 3965 Query 570 GTGGTCCCGCCAGATTCACA 589 ||||||| | |||||||| Sbjct 3964 GTGGTCCTTGCTGATTCACA 3945 >seq97334 Length=1701 Score = 136 bits (150), Expect = 1e-29 Identities = 164/220 (75%), Gaps = 6/220 (3%) Strand=Plus/Minus Query 137 GCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCAC 196 ||||| ||| || ||||||| |||||||||||||| | | ||| || |||| |||||| Sbjct 1465 GCTGCGCCTCAACGCATTTCAGGGAGAACCAGCTAGCTCTGGGTTCGAGTGGCATTTCAC 1406 Query 197 CCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGT 256 ||||| ||||| |||||| || | | |||||| | ||| ||||||| ||||||| || Sbjct 1405 CCCTAACCACAACTCATCCGCTGATTCTTCAACATCAGTCGGTTCGGACCTCCACTTAGT 1346 Query 257 CTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGT-CTTGATC-GTG 314 | |||| |||||| ||| |||||||||||||| | |||| || | | | | ||| Sbjct 1345 TTCACCCAAGCTTCATCCTAGTCATGGATAGATCACCCAGGTTCGAGTCCATAAGCAGTG 1286 Query 315 CCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCT 354 || | ||| ||| |||||| ||||||||||||| Sbjct 1285 ACAAT----TGCCTTATGAAGACTCGTTTTCGCTACGGCT 1250 >seq133955 Length=1348 Score = 123 bits (136), Expect = 9e-26 Identities = 106/130 (82%), Gaps = 1/130 (1%) Strand=Plus/Minus Query 470 GGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACT 529 ||||||| || ||||||||||||||| ||||| ||||||||| ||||||||||||||| Sbjct 641 GGTTTCATGTTCTATTTCACTCCCCGATGGGGGTTCTTTTCACCCTTCCCTCACGGTACT 582 Query 530 TGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACA 589 | |||||| ||||||| |||||||||||| || | |||||||| | |||||||| Sbjct 581 ACTTCGCTATGGGTCACCCAGGAGTATTTAGCCTGCA-AGGTGGTCCTAGCTGATTCACA 523 Query 590 CGAAATTTCA 599 || ||| || Sbjct 522 CGGGATTCCA 513 >seq221503 Length=941 Score = 116 bits (128), Expect = 1e-23 Identities = 90/107 (84%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 470 GGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACT 529 ||||||| || ||||||||||||||| ||||| ||||||||| ||||||||||||||| Sbjct 59 GGTTTCATGTTCTATTTCACTCCCCGATGGGGGTTCTTTTCACCCTTCCCTCACGGTACT 118 Query 530 TGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCC 576 | |||||| ||||||| |||||||||||| ||| |||||||| Sbjct 119 ACTTCGCTATGGGTCACCCAGGAGTATTTAGCCTTGCAAGGTGGTCC 165 >seq112647 Length=5682 Score = 116 bits (128), Expect = 1e-23 Identities = 123/160 (77%), Gaps = 8/160 (5%) Strand=Plus/Plus Query 401 ATTCTTCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTG 460 ||||||||| |||||||| |||| || |||| || | | |||| || | ||| Sbjct 1 ATTCTTCAACAGGCACGCGGTCAGA--GT-CCTAGTAGTCTC-----CTCCCACTGCTTG 52 Query 461 TAGGCACATGGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCT 520 || | ||||||| || ||||||||||||||| ||||| ||||||||| |||||| Sbjct 53 GGAGCTTACGGTTTCATGTTCTATTTCACTCCCCGATGGGGGTTCTTTTCACCCTTCCCT 112 Query 521 CACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAG 560 ||||||||| | |||||| ||||||| |||||||||||| Sbjct 113 CACGGTACTACTTCGCTATGGGTCACCCAGGAGTATTTAG 152 >seq24780 Length=16514 Score = 100 bits (110), Expect = 1e-18 Identities = 100/129 (78%), Gaps = 2/129 (2%) Strand=Plus/Minus Query 451 CGACGGATTGTAGGCACATGGTTTCAGGTACT--ATTTCACTCCCCGCCAGGGGTACTTT 508 |||| |||||| ||| | | |||||| || ||| |||||| |||| |||| Sbjct 8069 CGACTGATTGTTCGCATCGGATCTCAGGTTCTCTATTGCACTCCTTAAATAGGGTTCTTT 8010 Query 509 TCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACG 568 |||||||||||||||||||||||| || ||||||||| |||| || ||||||||| | Sbjct 8009 TCACCTTTCCCTCACGGTACTTGTACGTTATCGGTCATTGAGGAATACTTAGGCTTAGAG 7950 Query 569 GGTGGTCCC 577 ||||||||| Sbjct 7949 GGTGGTCCC 7941 >seq37916 Length=2427 Score = 96.9 bits (106), Expect = 1e-17 Identities = 98/125 (78%), Gaps = 2/125 (2%) Strand=Plus/Minus Query 468 ATGGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTA 527 ||||||||| | ||||||||||||||| ||||| ||||||||| |||||||| |||| Sbjct 394 ATGGTTTCATATTCTATTTCACTCCCCGATGGGGGTTCTTTTCACCCTTCCCTCATGGTA 335 Query 528 CTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGG-TCCCGC-CAGATT 585 | | | |||| ||||||| ||||||||||| ||| ||||| || || ||||| Sbjct 334 CCACTTCACTATTGGTCACCCGGGAGTATTTAGCCTTGCAAGGTGGTTCTTGCAGAGATT 275 Query 586 CACAC 590 ||||| Sbjct 274 CACAC 270 >seq105330 Length=1604 Score = 95.1 bits (104), Expect = 4e-17 Identities = 122/167 (73%), Gaps = 1/167 (1%) Strand=Plus/Minus Query 139 TGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCC 198 ||| ||| || ||||| | ||||||| ||||| | | |||||||| |||| || ||||| Sbjct 906 TGCGCCTTAACACATTTTGAGGAGAACTAGCTAGCTCTAAGTTTGAGTGGCATT-CACCC 848 Query 199 CTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCT 258 || | ||| | || | | | |||||| | ||| ||||||| ||| ||| ||| | Sbjct 847 TTAACTACAACTTATTTGTTGATTCTTCAACATCAGTTGGTTCGGACCTTCACTTGGTTT 788 Query 259 TACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTC 305 || | |||||| |||| |||||||||||||| | | |||| ||| Sbjct 787 CACGCAAGCTTCATCCTGGTCATGGATAGATCACCTAGATTCGAGTC 741 >seq106386 Length=4851 Score = 93.3 bits (102), Expect = 2e-16 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 484 TTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGT 543 |||||||||| | ||||| | |||||| ||||||||||||||| | |||||| ||| Sbjct 4622 TTTCACTCCCTGATGGGGGTTTTGTTCACCCTTCCCTCACGGTACTACTTCGCTATAGGT 4563 Query 544 CACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCA 587 |||| |||||||||||| ||| |||||||| |||||||| Sbjct 4562 CACCCAGGAGTATTTAGCCTTGCAAGGTGGTCCTTGCAGATTCA 4519 >seq238853 Length=1129 Score = 86.0 bits (94), Expect = 2e-14 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 507 TTTCACCTTT-CCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTA 565 |||||||||| |||||||||||||||| |||||||||||| |||| || ||||||||| Sbjct 1106 TTTCACCTTTTCCCTCACGGTACTTGTACGCTATCGGTCATTGAGGAATACTTAGGCTTA 1047 Query 566 ACGGGTGGTCCC 577 |||||||||| Sbjct 1046 GAGGGTGGTCCC 1035 >seq100106 Length=6949 Score = 86.0 bits (94), Expect = 2e-14 Identities = 67/80 (84%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 485 TTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTC 544 ||||||||||| |||||| ||||| ||| || |||||||||||| | |||||| |||| Sbjct 3831 TTCACTCCCCGATAGGGGTTCTTTTGACCATTTTCTCACGGTACTTCTTCGCTATAGGTC 3890 Query 545 ACCAAGGAGTATTTAGGCTT 564 || || |||||||||| ||| Sbjct 3891 ACTAAAGAGTATTTAGCCTT 3910 >seq99460 Length=13921 Score = 82.4 bits (90), Expect = 3e-13 Identities = 87/115 (76%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 137 GCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCAC 196 ||||| ||| || ||||||||||||||| ||||| | | |||||| |||| ||| || Sbjct 6999 GCTGCGCCTCAACACATTTCGGGGAGAACTAGCTAGCTCTGGGTTTGAGTGGCATTTAAC 6940 Query 197 CCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCAC 251 || || ||||| |||| | || | | |||||| | ||| |||| | ||||||| Sbjct 6939 CCTTAACCACAACTCATTCGCTGATTCTTCAACATTAGTCAGTTCAGACCTCCAC 6885 >seq56803 Length=3943 Score = 80.6 bits (88), Expect = 1e-12 Identities = 85/112 (76%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 137 GCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCAC 196 ||||| ||| || |||||||||||||||| ||||| | | | | | |||| |||||| Sbjct 1645 GCTGCGCCTCAACGCATTTCGGGGAGAACGAGCTAGCTCTGGGGTCAAGTGGCATTTCAC 1586 Query 197 CCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTC 248 ||||| ||||| |||| | || | | |||||| | | | ||||||| |||| Sbjct 1585 CCCTAGCCACAACTCATGCGCTGATTCTTCAACATCAATCGGTTCGGACCTC 1534 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1812619757824