Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucalyptus_20camaldulensis_20[genbank_20GCA_5F000260855.1_202012-01- 23] 274,001 sequences; 654,922,307 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq104329 129 1e-27 seq31885 102 2e-19 seq234950 95.1 3e-17 seq112499 91.5 3e-16 seq105330 91.5 3e-16 seq28402 89.7 1e-15 seq5793 89.7 1e-15 seq97334 84.2 5e-14 seq185018 82.4 2e-13 seq117043 75.2 3e-11 >seq104329 Length=9989 Score = 129 bits (142), Expect = 1e-27 Identities = 113/141 (80%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 259 CTTGACCAGTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTG 318 ||||| || ||||||||||| || ||||| |||| ||||| |||| | || ||||||||| Sbjct 9472 CTTGATCAATGAGCTATTACACATTCTTTTAAGGGTGGCTACTTCTAGGCAAACCTCCTG 9531 Query 319 GTTGTCTACGCAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGAT 378 | | ||| || | | || |||||| |||| ||| | || |||||||||||||||| | Sbjct 9532 GCTATCTCTACACCCCTACCTCCTTTATCACTAAGTGATCATTTAGGGGCCTTAGCTGGT 9591 Query 379 GATCTGGGCTGTTTCCCTCTC 399 |||| ||||| |||||||||| Sbjct 9592 GATCCGGGCTATTTCCCTCTC 9612 >seq31885 Length=14054 Score = 102 bits (112), Expect = 2e-19 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 207 CCACAGCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCA 266 ||| |||||| || ||| |||| ||| | ||| || ||| | |||| || | Sbjct 8529 CCATAGCTTCAGCAGATCGCTTAG--CCCTTTTCATCTTCAGCGTAAGAGCACTCGATTA 8472 Query 267 GTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTA 326 || |||||||||| || ||| || | |||||||| | || |||||||||| ||||| Sbjct 8471 GTAAGCTATTACGTACCGTTTTAATTGTAGCTGCTTCTAGGCAAACCTCCTGGCTGTCTT 8412 Query 327 CGCAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGG 386 || || || |||||| |||||||| || ||| ||||||||||| |||||| || Sbjct 8411 TCCACCTGTACCTCCTTTATCACTGAGTGTTCATTTAAGGGCCTTAGCTAGTGATCTAGG 8352 Query 387 CTGTTTCCCTCTC 399 ||||| |||||| Sbjct 8351 TTGTTTTCCTCTC 8339 >seq234950 Length=783 Score = 95.1 bits (104), Expect = 3e-17 Identities = 77/91 (85%), Gaps = 2/91 (2%) Strand=Plus/Minus Query 262 GACCAGTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTT 321 || || ||||||||||||||||||||||||| |||||||||| |||| |||||| ||| | Sbjct 710 GATCAATGAGCTATTACGCACTCTTTCAAGGGTGGCTGCTTCTAAGCAAACCTCATGGCT 651 Query 322 GTCTACGCAACTCC-ACATCCTTTCCCACTG 351 |||| || ||||| || |||||| ||||| Sbjct 650 GTCTCTGC-ACTCCTACCTCCTTTATCACTG 621 >seq112499 Length=33560 Score = 91.5 bits (100), Expect = 3e-16 Identities = 100/131 (76%), Gaps = 4/131 (3%) Strand=Plus/Plus Query 245 TCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCC 304 ||||||| | || | || |||||||||||||| ||||||||||||| |||||||||| Sbjct 2396 TCGGCGCAAGAGCATTCGATCAGTGAGCTATTACACACTCTTTCAAGGGTGGCTGCTTCT 2455 Query 305 AAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTGAGTCACCACTTAG 364 | || || |||| |||| ||| | | || |||||| |||| ||| | || ||| Sbjct 2456 AGGCAAA---CCTGACTGTCACTGCACCCCTACCTCCTTTATCACTCAGTGATCATTTA- 2511 Query 365 GGGCCTTAGCT 375 ||||||||||| Sbjct 2512 GGGCCTTAGCT 2522 >seq105330 Length=1604 Score = 91.5 bits (100), Expect = 3e-16 Identities = 139/194 (72%), Gaps = 3/194 (2%) Strand=Plus/Minus Query 207 CCACAGCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCA 266 ||| |||||| || ||| ||||| |||| | ||| || ||| | |||| || | Sbjct 1251 CCATAGCTTCAGCAGATCACTTA-GCCCTTTTTCATCTTCAGCGTAAGAGCACTCGATTA 1193 Query 267 GTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTA 326 || |||||||||| || ||| || | | |||||| | || |||||||| | | ||| Sbjct 1192 GTAAGCTATTACGTACCATTTTAATTGTTGTTGCTTCTAGGCAAACCTCCTAGCTATCTT 1133 Query 327 CGCAACTCC-ACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGG 385 ||| ||| || || ||| || ||||| || ||| ||||||||||| |||||||| Sbjct 1132 TGCA-CTCGTACCTCATTTATCATTGAGTGTTCATTTAAGGGCCTTAGCTAGTGATCTGG 1074 Query 386 GCTGTTTCCCTCTC 399 | ||||| |||||| Sbjct 1073 GTTGTTTTCCTCTC 1060 >seq28402 Length=3301 Score = 89.7 bits (98), Expect = 1e-15 Identities = 99/132 (75%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 268 TGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTAC 327 ||||||||||||||||||||||||| ||||| |||| | || | |||| || ||||| Sbjct 248 TGAGCTATTACGCACTCTTTCAAGGGTGGCTTCTTCTAGGCAAGCCTCTCGGCTGTCTCT 189 Query 328 GCAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGC 387 || | | || |||||| ||| || ||||||||||||||| ||||| |||| Sbjct 188 ACACCCCTACCTCCTTTATTGTTGAACGGTCATTTAGGGGCCTTAGCTAGTGATCCGGGC 129 Query 388 TGTTTCCCTCTC 399 | |||| | ||| Sbjct 128 TATTTCTCCCTC 117 >seq5793 Length=13627 Score = 89.7 bits (98), Expect = 1e-15 Identities = 76/91 (84%), Gaps = 2/91 (2%) Strand=Plus/Minus Query 262 GACCAGTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTT 321 || || ||||||||||||||||||||||||| |||||||||| || ||||||| ||| | Sbjct 93 GATCAATGAGCTATTACGCACTCTTTCAAGGGTGGCTGCTTCTAAAGCAACCTCATGGCT 34 Query 322 GTCTACGCAACTCC-ACATCCTTTCCCACTG 351 |||| || ||||| || |||||| ||||| Sbjct 33 GTCTCTGC-ACTCCTACCTCCTTTATCACTG 4 >seq97334 Length=1701 Score = 84.2 bits (92), Expect = 5e-14 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 315 CCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGC 374 ||||| ||||| ||| | | || |||||| |||||||| || |||||||||||||| Sbjct 1701 CCTGGCTGTCTCTGCACCCCTACCTCCTTTATCACTGAGTGGTCATTTAGGGGCCTTAGC 1642 Query 375 TGATGATCTGGGCTGTTTCCCTCTCG 400 || ||||| |||||||||||||||| Sbjct 1641 TGGTGATCCAGGCTGTTTCCCTCTCG 1616 >seq185018 Length=1430 Score = 82.4 bits (90), Expect = 2e-13 Identities = 133/189 (70%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 211 AGCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGA 270 |||||| || || |||| |||| | | ||| ||| || || | ||| | ||||| Sbjct 796 AGCTTCAGCAAATTGCTTA-GCCCTGTT-CATCTTCGATGCAAAAGCGCTTAATTAGTGA 739 Query 271 GCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCA 330 |||||||||||||||||||||| || |||||| | || | | | || | ||| || Sbjct 738 GCTATTACGCACTCTTTCAAGGGTGCTTGCTTCTAGGCAAGCTTGTCGGCTATCTCTACA 679 Query 331 ACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGT 390 | | || |||||| ||| || ||||||||||||||| | ||| ||||||| Sbjct 678 CCCCTACTTCCTTTATTGTTGAACGGACATTTAGGGGCCTTAGCTAGTAATCCGGGCTGT 619 Query 391 TTCCCTCTC 399 ||||| ||| Sbjct 618 TTCCCCCTC 610 >seq117043 Length=2367 Score = 75.2 bits (82), Expect = 3e-11 Identities = 70/89 (79%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 310 AACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCC 369 |||||||||| ||||| ||| | | | ||||| ||||||| || ||||||||| Sbjct 1092 AACCTCCTGGCTGTCTCTGCATCCCTGCCACCTTTATCACTGAGCGGTCATTTAGGGGCC 1033 Query 370 TTAGCTGATGATCTGGGCTGTTTCCCTCT 398 ||||||| ||||| ||||||||| ||||| Sbjct 1032 TTAGCTGGTGATCCGGGCTGTTTTCCTCT 1004 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1174373364224