Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucalyptus_20camaldulensis_20[genbank_20GCA_5F000260855.1_202012-01- 23] 274,001 sequences; 654,922,307 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq109372 95.1 2e-17 seq111809 93.3 7e-17 seq103716 77.0 5e-12 seq115147 75.2 2e-11 seq115048 75.2 2e-11 seq103084 75.2 2e-11 >seq109372 Length=11164 Score = 95.1 bits (104), Expect = 2e-17 Identities = 75/90 (83%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 201 CTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCGGCTGCTGGCA 260 |||||| |||||| | |||||||||||||||| ||| ||||||| ||||||||||||| Sbjct 1917 CTTTACGCCCAATCATTCCGGATAACGCTTGCATCCTCTGTATTACTGCGGCTGCTGGCA 1976 Query 261 CGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 | |||||||| ||||||||| ||| || Sbjct 1977 CAGAGTTAGCCAATGCTTATTCCCCAGATA 2006 >seq111809 Length=12013 Score = 93.3 bits (102), Expect = 7e-17 Identities = 87/111 (78%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 151 GGGTTGAGCCCATAGTTTTCACATCTGACTTGCCTTCCCGCCTACACGCCCTTTACACCC 210 ||||||||||| | ||| || | ||||| | || |||||| | |||||| ||| Sbjct 10053 GGGTTGAGCCCTGGGATTTGACGGCGGACTTACAAAGCCACCTACAGACGCTTTACGCCC 9994 Query 211 AATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCGGCTGCTGGCAC 261 ||| | |||||||||||||||| ||| |||||||||||||||||||||| Sbjct 9993 AATCATTCCGGATAACGCTTGCATCCTCTGTATTACCGCGGCTGCTGGCAC 9943 >seq103716 Length=6833 Score = 77.0 bits (84), Expect = 5e-12 Identities = 89/120 (74%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65 |||||||| ||||| |||||| | | |||||| || |||||| |||||||| | Sbjct 127 GCTTTCGCCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTCGCCGTTGGTGTTCTTT 68 Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125 | || |||||||||||||||||| ||| | |||||| |||| || | | |||| || Sbjct 67 CCGATCTCTACGCATTTCACCGCTCCACCGGAAATTCCCTCTGCCCCTACCGTACTCCAG 8 >seq115147 Length=8160 Score = 75.2 bits (82), Expect = 2e-11 Identities = 74/96 (77%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247 ||||||| | | |||||| || ||| | ||| |||||||||| ||| |||||| | Sbjct 177 CCGCCTATAGACACTTTACGCCAAATCATTCCAAATAACGCTTGTATCCTCTGTATTATC 236 Query 248 GCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCC 283 ||||||||||||| ||||||||| |||||| || Sbjct 237 GCGGCTGCTGGCATTGAGTTAGCCGATGCTTATACC 272 >seq115048 Length=6719 Score = 75.2 bits (82), Expect = 2e-11 Identities = 74/96 (77%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247 ||||||| | | |||||| || ||| | ||| |||||||||| ||| |||||| | Sbjct 6543 CCGCCTATAGACACTTTACGCCAAATCATTCCAAATAACGCTTGTATCCTCTGTATTATC 6484 Query 248 GCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCC 283 ||||||||||||| ||||||||| |||||| || Sbjct 6483 GCGGCTGCTGGCATTGAGTTAGCCGATGCTTATACC 6448 >seq103084 Length=15254 Score = 75.2 bits (82), Expect = 2e-11 Identities = 74/96 (77%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247 ||||||| | | |||||| || ||| | ||| |||||||||| ||| |||||| | Sbjct 571 CCGCCTATAGACACTTTACGCCAAATCATTCCAAATAACGCTTGTATCCTCTGTATTATC 512 Query 248 GCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCC 283 ||||||||||||| ||||||||| |||||| || Sbjct 511 GCGGCTGCTGGCATTGAGTTAGCCGATGCTTATACC 476 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 826600045971