Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucalyptus_20camaldulensis_20[genbank_20GCA_5F000260855.1_202012-01- 23] 274,001 sequences; 654,922,307 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq199943 172 9e-41 seq65914 111 2e-22 seq61324 78.8 1e-12 seq98781 75.2 2e-11 >seq199943 Length=965 Score = 172 bits (190), Expect = 9e-41 Identities = 154/191 (81%), Gaps = 3/191 (2%) Strand=Plus/Minus Query 37 ATCCCTTCCAAACTTAGCTTCCCAGC-TATGCACTTGGCAGTACAACTGGTGCACCAGAG 95 |||| ||| |||| ||| |||||| | | | | |||| | ||||||| |||||||| Sbjct 633 ATCCGCTCCGCACTTGGCTACCCAGCGTTTACCGTGGGCACGATAACTGGTACACCAGAG 574 Query 96 GTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTCCTACGCCCAC 155 || |||| ||||||||||||||||||| ||| || ||||||||| || |||||||| Sbjct 573 GTGCGTCCTTCCCGGTCCTCTCGTACTAGGGAAAGGTCCTCTCAATGCTCTAACGCCCAC 514 Query 156 GACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGT--GCCTCTTTA 213 || ||| ||||||||||||||| |||||||||||||||||||| ||| || ||||| Sbjct 513 ACCGAATATGGACCGAACTGTCTCACGACGTTCTGAACCCAGCTCACGTACCCCGCTTTA 454 Query 214 ATGGGCGAACA 224 ||||||||||| Sbjct 453 ATGGGCGAACA 443 >seq65914 Length=1117 Score = 111 bits (122), Expect = 2e-22 Identities = 108/138 (78%), Gaps = 1/138 (1%) Strand=Plus/Minus Query 4 GGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC- 62 || |||||| ||||||||| |||||| |||||| |||| |||| ||| || ||| Sbjct 706 GGTGGGCTTACTACTTAGATGCTTTCAGCAGTTATCCGCTCCACACTTGGCTACCTAGCG 647 Query 63 TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACT 122 | | | | |||| | ||||||| |||||||||| |||| |||||||||||||||||| Sbjct 646 TTTACCGTGGGCACGATAACTGGTACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACT 587 Query 123 AAGGACAGCTCCTCTCAA 140 | ||| || ||||||||| Sbjct 586 AGGGAAAGGTCCTCTCAA 569 >seq61324 Length=2471 Score = 78.8 bits (86), Expect = 1e-12 Identities = 73/93 (78%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 133 CCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAA 192 |||||||| || | |||||| || ||| |||| | |||||||| |||||| |||| Sbjct 759 CCTCTCAATGCTCTAATGCCCACACCGAATATGGACTGGACTGTCTCATGACGTTTTGAA 818 Query 193 CCCAGCTCGCGTGCCTCTTTAATGGGCGAACAG 225 |||||||| ||| || ||||||||||| || || Sbjct 819 CCCAGCTCACGTACCACTTTAATGGGCAAAAAG 851 >seq98781 Length=10386 Score = 75.2 bits (82), Expect = 2e-11 Identities = 102/142 (72%), Gaps = 4/142 (3%) Strand=Plus/Plus Query 102 CCATCCCGGTCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTCC----TACGCCCACGA 157 ||| ||| |||||||||||||| || |||||| ||| | ||| || || || Sbjct 7598 CCAACCCAGTCCTCTCGTACTAGGGTTGGCTCCTTCCAATTCTCCCTTTTATACCAACAG 7657 Query 158 CGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGG 217 |||||| || |||| ||||| | ||||||| |||||| ||| | | || | || || Sbjct 7658 TAGATAGGAACTGAACCGTCTCACAACGTTCTTAACCCAACTCACATACCACCTTGATCA 7717 Query 218 GCGAACAGCCCAACCCTTGGGA 239 |||| | || ||||||||||| Sbjct 7718 ACGAATAACCAAACCCTTGGGA 7739 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 778727456436