Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucalyptus_20camaldulensis_20[genbank_20GCA_5F000260855.1_202012-01- 23] 274,001 sequences; 654,922,307 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq103716 147 5e-33 seq124172 127 5e-27 seq108409 125 2e-26 seq111809 107 5e-21 seq215151 102 2e-19 seq109372 84.2 5e-14 seq115147 73.4 9e-11 seq115048 73.4 9e-11 seq103084 73.4 9e-11 >seq103716 Length=6833 Score = 147 bits (162), Expect = 5e-33 Identities = 141/181 (78%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 165 GCTAGAGTGCAGGAGGGGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTA 224 ||| |||| | | ||||||| |||||| | ||| |||||||||||||||||| || Sbjct 7 GCTGGAGTACGGTAGGGGCAGAGGGAATTTCCGGTGGAGCGGTGAAATGCGTAGAGATCG 66 Query 225 GGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAG 284 | | |||||||| |||||| || |||||| | | |||||||||||| |||||| Sbjct 67 GAAAGAACACCAACGGCGAAAGCACTCTGCTGGGCCGACACTGACACTGAGAGGCGAAAG 126 Query 285 CGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAG 344 | ||||||| || ||||||||||||| ||||||| ||||||||||||| ||||||| Sbjct 127 CTAGGGGAGCGAATGGGATTAGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAG 186 Query 345 G 345 | Sbjct 187 G 187 >seq124172 Length=9616 Score = 127 bits (140), Expect = 5e-27 Identities = 167/228 (73%), Gaps = 10/228 (4%) Strand=Plus/Plus Query 190 AATTCCTA--GTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGC 247 ||||||| ||| |||||||||||||||| | || | | |||||||| ||||||| || Sbjct 2791 AATTCCTCCGGTGGAGCGGTGAAATGCGTAAAGATCGGAAAGAACACCAATGGCGAAAGC 2850 Query 248 GGCTTGCTGG------ACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGG 301 |||| | |||| |||||||||||| ||||||| ||||||| || || Sbjct 2851 ACTCTGCTAGGCCGACACTGACACTGACACTGAGAGGCGAAAGCTAGGGGAGCGAATGGG 2910 Query 302 ATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCAT-AA 360 ||||||||||| ||||||| ||||||||||||| |||||||| | | | || || | Sbjct 2911 ATTAGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGCG-CTGTACGTATCGA 2969 Query 361 GTGCTCCGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 | | ||| | ||| ||| || ||||||| || ||||| ||||| Sbjct 2970 CCCATGCAATGCTGTAGCTAACACATTAAGTATCCCGCCTGGAGAGTA 3017 >seq108409 Length=5818 Score = 125 bits (138), Expect = 2e-26 Identities = 197/282 (70%), Gaps = 0/282 (0%) Strand=Plus/Minus Query 62 AGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTG 121 ||| ||||||| ||| | |||| |||||| || ||||||| || ||||||| | | Sbjct 3142 AGCATTATCCGAAATGATTGGGTGTAAAGTGTCTATAGGTGGCTTTTTAAGTCCGCCATC 3083 Query 122 AAAGGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGG 181 ||| | ||||||||| || || | |||||| | ||| |||| || |||| Sbjct 3082 AAATCGCAAGGCTCAACCTTGGACAAGCAGTGGAAACTACCAAGCTGGAGTATAGTAGGG 3023 Query 182 GCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGC 241 | | ||||| ||| |||||||||||||||||| || || | |||||||| ||| Sbjct 3022 GTAGAGAGAATTTTCGGTGGAGCGGTGAAATGCGTAGAGATAAGAAAGAACACCATCGGC 2963 Query 242 GAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGG 301 || || ||| || | | |||||||||| | |||| ||| ||| || || Sbjct 2962 AAAAGCACTTTGTTGAGCCAACATTGACACTGAGAGGCAAAAGTTAGGGAAGCCAATGGG 2903 Query 302 ATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTA 343 |||||||||||| ||||||| | ||||| |||| |||||| Sbjct 2902 ATTAGATACCCTAGTAGTCCTAACTGTAAATGATGGATACTA 2861 >seq111809 Length=12013 Score = 107 bits (118), Expect = 5e-21 Identities = 92/114 (81%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 30 GTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGCGTAAA 89 |||||||||||||||||||||| ||| || ||||||||||||||| | |||||||||| Sbjct 9943 GTGCCAGCAGCCGCGGTAATACAGAGGATGCAAGCGTTATCCGGAATGATTGGGCGTAAA 10002 Query 90 GGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCTCAACCCCGG 143 | || |||||||| || |||||| | || ||| | | |||||||||| || Sbjct 10003 GCGTCTGTAGGTGGCTTTGTAAGTCCGCCGTCAAATCCCAGGGCTCAACCCTGG 10056 >seq215151 Length=783 Score = 102 bits (112), Expect = 2e-19 Identities = 194/283 (69%), Gaps = 2/283 (1%) Strand=Plus/Minus Query 62 AGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTG 121 ||| ||||||| ||| | |||| |||||| || ||||||| || ||||||| | Sbjct 705 AGCATTATCCGAAATGATTGGGTGTAAAGTGTCTATAGGTGGCTTTTTAAGTCCACCATC 646 Query 122 AAAGGCTATGGCTCAACCCCGGGACTGCTTTTG-AAACTGCAGGGCTAGAGTGCAGGAGG 180 ||| | |||||||||| || || | | || ||||| | | |||| || ||| Sbjct 645 AAATTGCAAGGCTCAACCCTGG-ACAGGTAGTGGAAACTATCAAGTTGGAGTATAGTAGG 587 Query 181 GGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGG 240 || | ||||| | ||| || ||||||||||||||| || || | |||| || || Sbjct 586 GGTAGAGAGAATTTCCGGTGGAGTGGTGAAATGCGTAGAGATAAGAAAAAACAACATCGG 527 Query 241 CGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAG 300 | || || ||| || | | ||||||| || | |||| ||| ||| || | Sbjct 526 CAAAAGCACTTTGTTGAGCCAACATTGACACTAAGAGGCAAAAGTTAGGGAAGCCAATGG 467 Query 301 GATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTA 343 ||||||||||||| ||||||| | ||||| |||| |||||| Sbjct 466 GATTAGATACCCTAGTAGTCCTAACTGTAAATGATGGATACTA 424 >seq109372 Length=11164 Score = 84.2 bits (92), Expect = 5e-14 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 20 GGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTAC 79 |||||||| |||||||||||||| ||||||| ||| || ||||||||||||||| | Sbjct 1987 GGCTAACTCTGTGCCAGCAGCCGCAGTAATACAGAGGATGCAAGCGTTATCCGGAATGAT 1928 Query 80 TGGGCGTAAAGGGT 93 ||||||||||| || Sbjct 1927 TGGGCGTAAAGCGT 1914 >seq115147 Length=8160 Score = 73.4 bits (80), Expect = 9e-11 Identities = 78/102 (76%), Gaps = 1/102 (1%) Strand=Plus/Minus Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72 |||| ||||||||| |||||||||||||| |||||| ||| | |||||||| | Sbjct 267 AAGCATCGGCTAACTCAATGCCAGCAGCCGCGATAATACAGAGGATACAAGCGTTATTTG 208 Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 114 |||| | | ||||||||| || |||| || || ||||||| Sbjct 207 GAATGATTTGGCGTAAAGTGTCTATAGGCGGCTT-TTAAGTC 167 >seq115048 Length=6719 Score = 73.4 bits (80), Expect = 9e-11 Identities = 78/102 (76%), Gaps = 1/102 (1%) Strand=Plus/Plus Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72 |||| ||||||||| |||||||||||||| |||||| ||| | |||||||| | Sbjct 6453 AAGCATCGGCTAACTCAATGCCAGCAGCCGCGATAATACAGAGGATACAAGCGTTATTTG 6512 Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 114 |||| | | ||||||||| || |||| || || ||||||| Sbjct 6513 GAATGATTTGGCGTAAAGTGTCTATAGGCGGCTT-TTAAGTC 6553 >seq103084 Length=15254 Score = 73.4 bits (80), Expect = 9e-11 Identities = 78/102 (76%), Gaps = 1/102 (1%) Strand=Plus/Plus Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72 |||| ||||||||| |||||||||||||| |||||| ||| | |||||||| | Sbjct 481 AAGCATCGGCTAACTCAATGCCAGCAGCCGCGATAATACAGAGGATACAAGCGTTATTTG 540 Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 114 |||| | | ||||||||| || |||| || || ||||||| Sbjct 541 GAATGATTTGGCGTAAAGTGTCTATAGGCGGCTT-TTAAGTC 581 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1199903219968