Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucalyptus_20camaldulensis_20[genbank_20GCA_5F000260855.1_202012-01- 23] 274,001 sequences; 654,922,307 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq97334 114 4e-23 seq138279 100 1e-18 seq105330 84.2 7e-14 seq99460 78.8 3e-12 >seq97334 Length=1701 Score = 114 bits (126), Expect = 4e-23 Identities = 125/166 (75%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 22 GTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTA 81 ||| ||| | | ||| |||| | |||||||| ||||| | ||||||||| | ||| Sbjct 1284 GTCACTGCTTATGGACTCGAACCTGGGTGATCTATCCATGACTAGGATGAAGCTTGGGTG 1343 Query 82 ACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAG 141 | || |||||||||||||| ||| |||||||| ||| || ||||||| ||||| ||| Sbjct 1344 AAACTAAGTGGAGGTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAG 1403 Query 142 GGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAA 187 |||||||| || | | ||| || |||||||||||| | |||| Sbjct 1404 GGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTCCCTGAAA 1449 >seq138279 Length=1048 Score = 100 bits (110), Expect = 1e-18 Identities = 114/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 35 GACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAG 94 ||||| || | |||||||| ||||| ||| ||||||| | ||| | || ||||| Sbjct 640 GACCCAAACCTGGGTGATCTATCCATGACCAAGATGAAGCTTGGGTGAAACTAAGTGGAG 581 Query 95 GTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTA 154 || |||| ||| |||||||| ||| || |||||| ||||| ||||||||||| || | Sbjct 580 GTTTAAACCGACTGATGTTGAAGAATCAGCAGATGAGTTGTGGTTAGGGGTGAAATGCCA 521 Query 155 AACAAACTTGGAAATAGCTGGTTCTCTCCGAAA 187 | ||| || |||||||||||| |||||| Sbjct 520 CTCGAACCAAGAGCTAGCTGGTTCTCCCCGAAA 488 >seq105330 Length=1604 Score = 84.2 bits (92), Expect = 7e-14 Identities = 107/146 (73%), Gaps = 1/146 (1%) Strand=Plus/Plus Query 35 GACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAG 94 ||| |||| | | |||||||| ||||| ||||||||||| | || | || || || Sbjct 741 GACTCGAATCTAGGTGATCTATCCATGACCAGGATGAAGCTTGCGTGAAACCAAGTGAAG 800 Query 95 GTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTA 154 ||||||||| ||| |||||||| ||| | || || ||| | || ||||| || || | Sbjct 801 GTCCGAACCAACTGATGTTGAAGAATCAACAAATAAGTTGTAGTTAAGGGTG-AATGCCA 859 Query 155 AACAAACTTGGAAATAGCTGGTTCTC 180 ||||||| || ||||| |||||| Sbjct 860 CTCAAACTTAGAGCTAGCTAGTTCTC 885 >seq99460 Length=13921 Score = 78.8 bits (86), Expect = 3e-12 Identities = 76/98 (78%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 90 TGGAGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAA 149 |||||||| |||| |||||||||||| ||| || | ||||| ||||| || |||| ||| Sbjct 6886 TGGAGGTCTGAACTGACTAATGTTGAAGAATCAGCGAATGAGTTGTGGTTAAGGGTTAAA 6945 Query 150 GGCTAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAA 187 || | ||||| || ||||| |||||| |||||| Sbjct 6946 TGCCACTCAAACCCAGAGCTAGCTAGTTCTCCCCGAAA 6983 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1684970479104