Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucalyptus_20camaldulensis_20[genbank_20GCA_5F000260855.1_202012-01- 23] 274,001 sequences; 654,922,307 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq109320 181 8e-41 >seq109320 Length=8125 Score = 181 bits (200), Expect = 8e-41 Identities = 571/874 (65%), Gaps = 18/874 (2%) Strand=Plus/Plus Query 61064 TGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCT 61123 ||||||| ||| |||| | | || ||| |||||||| ||||||| || ||||||| Sbjct 1570 TGTTCCCTATCCAGTACCCGCAGATCTGGGAGATGTACAAGCAGGCGGAGGCCTCCTTCT 1629 Query 61124 GGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAGCGTTTATCGAGCG 61183 |||| | ||||||||||| | ||| | ||| | |||||||| | | | || Sbjct 1630 GGACCGCCGAGGAGGTCGACCTCTCCCAGGACCTCCGCCACTGGGAGGGCCTCACCGCCG 1689 Query 61184 GTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCA 61243 || | |||||| | | || ||| | || ||||| ||||| || ||||| |||||| Sbjct 1690 ACGAGCGCCATTTCGTCACCCACGTGCTCGCCTTCTTCGCCGCCTCCGACGGCATCGTCC 1749 Query 61244 ATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCT 61303 ||||| | | || ||| | ||||||| || | |||||||| || |||| Sbjct 1750 TCGAGAACCTCGCCGTCCGCTTCATGAAGGAGGTCCAGCTCTCGGAGGCCCGCGCCTTCT 1809 Query 61304 ACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATA 61363 ||||||||||||| ||||| ||||| ||||||| ||||||||||| | || | || | Sbjct 1810 ACGGCTTCCAGATCGCCATCGAGAACATCCACTCCGAGATGTACAGCCTCCTACTGGAGA 1869 Query 61364 CGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGG 61423 | ||| ||| ||| || || || || | ||| |||| |||| || | |||| Sbjct 1870 CCTACGTCAAGGACTCCGCCGAGAAGGACCGCCTCTTCCGTGCCGTCGACACCGTCCCGG 1929 Query 61424 CGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCTA--CATT 61481 | || || || || || |||||| || |||||| || ||| | | || Sbjct 1930 CCGTCGCCCGCAAGGCCGACTGGGCCCTCCGCTGGATC-----GACGGCGGTGAGTCCTT 1984 Query 61482 TGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGG-ATCGTTTG 61540 | || || | ||||| || || |||||||| | || ||| || | | | || Sbjct 1985 CGCGGAGCGCCTCCTGGCCTTCGCCTGCGTCGAGGGGATCTTCTTCTCCGGCAGCTTCTG 2044 Query 61541 CCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGT 61600 ||| ||||| ||| | ||||| || || || ||||| || || |||||| || ||| Sbjct 2045 -CGCCATCTTCTGGCTCAAGAAGCGGGGCCTCATGCCGGGGCTCACCTTCTCGAACGAGC 2103 Query 61601 TGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATC 61660 | || || |||||||||||| | || || || || || | || | | |||| | Sbjct 2104 TCATCTCCCGCGACGAGGGCCTCCACTGCGACTTCGCCTGCCTCCTCT--ACTCGCT-GC 2160 Query 61661 TGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCG 61720 || ||| ||| |||||||||||| | ||| || || ||||| || |||| Sbjct 2161 TGCGGAACAAGCCGAGCGAGGAGCGTGTGAAGGGGATCGTGCGGGAGGCCGTCGACATCG 2220 Query 61721 AACAGGAATT--TCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACT 61778 | | ||| || |||| ||||| |||| | | || | || ||||| | | || Sbjct 2221 AGCGGGAGTTCGTCTG--CGACGCGCTGCCGTGCGCCCTGGTGGGGATGAACAGCGACCT 2278 Query 61779 AATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGC- 61837 || ||| || || || || |||||||| ||| | | || | || || || Sbjct 2279 GATCGGCAAGTGCATCGAGTTCGTCGCCGACCGGCTGCTCGGCGCGCTCGG-CTGTGGCA 2337 Query 61838 GGATCTATAATACGAAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGA 61897 | | || | || ||||| || || | ||||| | || |||||| | || |||| Sbjct 2338 AGGTGTACGACGTGACGAACCCGTTCGACTGGATGGAGCTCATCTCGCTGCAGGGGAAGA 2397 Query 61898 CGAATTTTTTCGAGAAACGTGTAGGCGACTATCA 61931 | || || |||||||| || || || || || || Sbjct 2398 CCAACTTCTTCGAGAAGCGGGTCGGGGAGTACCA 2431 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396240366514640