Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucalyptus_20grandis_20[refseq_20GCF_5F000612305.1_202014-05-02] 4,951 sequences; 691,429,809 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq4951 226 7e-57 seq428 118 3e-24 seq320 111 4e-22 seq23 109 1e-21 seq7 107 5e-21 seq1 105 2e-20 seq10 102 2e-19 seq4043 95.1 3e-17 seq9 91.5 4e-16 seq11 86.0 2e-14 seq5 78.8 2e-12 seq2 78.8 2e-12 >seq4951 Length=160137 Score = 226 bits (250), Expect = 7e-57 Identities = 296/409 (72%), Gaps = 2/409 (0%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || ||| ||||||||| ||||||||| |||||||||||||||||||||| ||| ||| Sbjct 105978 TATCTGGGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGATGC 106037 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| |||||| | |||||||||||||| | ||| || | | |||| | | || Sbjct 106038 AAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCCGCCGT 106097 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 ||||||| ||||| |||| ||| || | | ||| | || |||| | || Sbjct 106098 CAAATCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGG 106157 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 || | |||||| | ||| ||| |||||||||||||| || | | ||||||||| || Sbjct 106158 GGCAGAGGGAATTTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGG 106217 Query 243 CGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 302 |||| ||| | ||||| |||||||| || | ||||||| ||||||| || | Sbjct 106218 CGAAAGCACTCTGCTGGGCCGACACTGACACTGAGAGGCGAAAGCTAGGGGAGCGAATGG 106277 Query 303 GATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTACT 362 |||||||||||| ||||||| ||| |||||||| ||||| | || | | | Sbjct 106278 GATTAGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGCGCTGTGCGTATCGA 106337 Query 363 TCCTTG--GTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 || || || ||||||||||||| |||| ||||||||||| ||| Sbjct 106338 CCCGTGCAGTGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTAC 106386 Score = 226 bits (250), Expect = 7e-57 Identities = 296/409 (72%), Gaps = 2/409 (0%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || ||| ||||||||| ||||||||| |||||||||||||||||||||| ||| ||| Sbjct 143032 TATCTGGGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGATGC 142973 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| |||||| | |||||||||||||| | ||| || | | |||| | | || Sbjct 142972 AAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCCGCCGT 142913 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 ||||||| ||||| |||| ||| || | | ||| | || |||| | || Sbjct 142912 CAAATCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGG 142853 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 || | |||||| | ||| ||| |||||||||||||| || | | ||||||||| || Sbjct 142852 GGCAGAGGGAATTTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGG 142793 Query 243 CGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 302 |||| ||| | ||||| |||||||| || | ||||||| ||||||| || | Sbjct 142792 CGAAAGCACTCTGCTGGGCCGACACTGACACTGAGAGGCGAAAGCTAGGGGAGCGAATGG 142733 Query 303 GATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTACT 362 |||||||||||| ||||||| ||| |||||||| ||||| | || | | | Sbjct 142732 GATTAGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGCGCTGTGCGTATCGA 142673 Query 363 TCCTTG--GTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 || || || ||||||||||||| |||| ||||||||||| ||| Sbjct 142672 CCCGTGCAGTGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTAC 142624 >seq428 Length=28134 Score = 118 bits (130), Expect = 3e-24 Identities = 160/222 (72%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 190 GGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGC 249 |||||| | ||| ||| |||||||||||||| || | | ||||||||| |||||| || Sbjct 3255 GGAATTTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGGCGAAAGC 3196 Query 250 AGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGA 309 | | ||||| |||||||| || | ||||||| ||||||| || |||||||| Sbjct 3195 ACTCTGCTGGGCCGACACTGACACTGAGAGGCGAAAGCTAGGGGAGCGAATGGGATTAGA 3136 Query 310 TACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTACTTCCTTG- 368 ||||| ||||||| ||| |||||||| ||||| | || | | | || || Sbjct 3135 TACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGCGCTGTGCGTATCGACCCGTGC 3076 Query 369 -GTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 | ||||||||||||| |||| ||||||||||| ||| Sbjct 3075 AATGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTAC 3034 >seq320 Length=36444 Score = 111 bits (122), Expect = 4e-22 Identities = 111/144 (77%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || ||| ||||||||| ||||||||| ||||||| |||||||||||||| ||| ||| Sbjct 25543 TATCTGGGGAATAAGCATCGGCTAACTCTGTGCCAGTAGCCGCGGTAATACAGAGGATGC 25602 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| ||||| | ||| |||||||||| | ||| || | | |||| | || Sbjct 25603 AAGCGTTATCTGGAATGATTGGACGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCCACCGT 25662 Query 123 GAAATCCCCGGGCTTAACCTGGGA 146 |||||| ||||| ||||| ||| Sbjct 25663 CAAATCCTAGGGCTCAACCTTGGA 25686 >seq23 Length=625428 Score = 109 bits (120), Expect = 1e-21 Identities = 222/327 (68%), Gaps = 2/327 (1%) Strand=Plus/Plus Query 12 AATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAA 71 |||||||| ||||||||| |||||||| || |||||||| ||| |||||| |||| Sbjct 541705 AATAAGCATCGGCTAACTCTATGCCAGCAACCATGGTAATACAGAGGATGCAAGTGTTAT 541764 Query 72 TCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCCC 131 | ||||| | || ||||||| ||| | || || | | | || | | || ||||||| Sbjct 541765 TTGGAATGATTGAGCGTAAAACGTCTGTAGATGGCTTTTTGAGGCTGCCGTCAAATCCCA 541824 Query 132 GGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGT-GTCAGAGGGGGGTG 190 ||||| |||| ||| | | | | ||| | ||| ||| | || || | | | | Sbjct 541825 GGGCTCAACCCTGGACAAGTAGTAGAAACTACCAAGCTAAAGTATAGTAAGGGTAGAG-G 541883 Query 191 GAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCA 250 ||||| ||| ||| ||||||||| | || | | | ||||||||| || ||| ||| Sbjct 541884 GAATTTTCGGTGGAGCGGTGAAATGCATGGAGACTGGAAAGAACACCAACGGTGAAAGCA 541943 Query 251 GCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGAT 310 || || ||| |||| || | |||||| ||||||| || ||||||||| Sbjct 541944 CTATGCTAGGTCGACATTGACACTAAGAGTTGAAAGCTAGGGGAGCGAATGGGATTAGAT 542003 Query 311 ACCCTGGTAGTCCACGCCCTAAACGAT 337 || | |||||| || ||||| || Sbjct 542004 ACTCCAATAGTCCTAGCTGTAAACAAT 542030 >seq7 Length=52445601 Score = 107 bits (118), Expect = 5e-21 Identities = 127/171 (74%), Gaps = 1/171 (1%) Strand=Plus/Plus Query 167 ACTAGAGTGTGTCAGAGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGT 226 ||| ||||| | |||||| | |||||||| | ||||| ||||||| | |||| | | Sbjct 38857808 ACTTGAGTGAGACAGAGGAGAGTGGAATTTCGTTTGTAGAGGTGAAATCTGGAGATCTAT 38857867 Query 227 GGAGGAACACCAATGGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAG 286 | |||| |||| |||||| |||| | ||||| || ||| || || |||||| Sbjct 38857868 GAAGGAGG-CCAAAAGCGAAGACAGCTCTCTGGGTCCCTACCGACACTGGTGTGCGAAAG 38857926 Query 287 CGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337 | | ||| || ||| | ||||||||||||||||||||| ||| |||||||| Sbjct 38857927 CATTGGGGGCGAACGGAATTAGATACCCTGGTAGTCCATGCCGTAAACGAT 38857977 >seq1 Length=40297282 Score = 105 bits (116), Expect = 2e-20 Identities = 79/93 (85%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || ||| ||||||||| ||||||||| |||||||||||||||||||||| || ||| Sbjct 3755480 TATCTGGGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGAATGC 3755421 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGT 95 |||||||| |||||| | |||||||||||||| Sbjct 3755420 AAGCGTTATCCGGAATGATTGGGCGTAAAGCGT 3755388 >seq10 Length=39358841 Score = 102 bits (112), Expect = 2e-19 Identities = 110/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 192 AATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCAG 251 |||| | ||| ||| |||||||||||||| || | | ||||||||| |||||| ||| Sbjct 30526395 AATTTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGGCGAAAGCAC 30526336 Query 252 CCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATA 311 | || || |||||||| || | ||||||| ||||||| || |||||||||| Sbjct 30526335 TCTGCTAGGCCGACACTGACACTGAGAGGCGAAAGCTAGGGGAGCGAATGGGATTAGATA 30526276 Query 312 CCCTGGTAGTCCACGCCCTAAACGAT 337 ||| ||||||| ||| |||||||| Sbjct 30526275 CCCCAGTAGTCCTAGCCGTAAACGAT 30526250 >seq4043 Length=3217 Score = 95.1 bits (104), Expect = 3e-17 Identities = 82/102 (80%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 236 CCAATGGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAG 295 ||||||||| | |||| || || | | |||| || | | |||||||||| ||||| Sbjct 1792 CCAATGGCGGAAGCAGGTTACTAGGTAGAGATTGACACTGAGGTACGAAAGCGTAGGGAG 1733 Query 296 CAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337 ||||||| ||||||||| ||||||||| |||||||||||||| Sbjct 1732 CAAACAGAATTAGATACTCTGGTAGTCTACGCCCTAAACGAT 1691 >seq9 Length=39018107 Score = 91.5 bits (100), Expect = 4e-16 Identities = 71/85 (84%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 11 GAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTA 70 ||||||||| ||||||||| ||||||||||||||||||||| ||| | |||| |||| Sbjct 964613 GAATAAGCATCGGCTAACTCAGTGCCAGCAGCCGCGGTAATATAAAGGATACAAGTGTTA 964672 Query 71 ATCGGAATTACTGGGCGTAAAGCGT 95 ||||||| | | ||||||||| || Sbjct 964673 TTCGGAATGATTTGGCGTAAAGTGT 964697 Score = 91.5 bits (100), Expect = 4e-16 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 11 GAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTA 70 ||||||||| | ||||||| |||||||||||| || |||||| ||| | ||||||||| Sbjct 2019088 GAATAAGCATCAGCTAACTCAGTGCCAGCAGCCACGATAATACAGAGGATACAAGCGTTA 2019147 Query 71 ATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGG 105 ||||||| | | ||||||||| || | |||||| Sbjct 2019148 TTCGGAATGATTTGGCGTAAAGTGTCTGTAGGCGG 2019182 >seq11 Length=45509462 Score = 86.0 bits (94), Expect = 2e-14 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || ||| ||||||||| ||||||||| |||||||||||||||||||||| ||| ||| Sbjct 19774160 TATCTGGGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGATGC 19774101 Query 63 AAGCGTTAATCGGAA 77 |||||||| ||||| Sbjct 19774100 AAGCGTTATCCGGAA 19774086 >seq5 Length=74729908 Score = 78.8 bits (86), Expect = 2e-12 Identities = 100/139 (72%), Gaps = 8/139 (6%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || ||| |||||| || ||||||||| |||| |||||||||| ||| ||| Sbjct 8711701 TATCTGGGGAATAAACATCGGCTAACTCTGTGC--------GCGGTAATACAAAGGATGC 8711650 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| |||||| | ||| |||||||||| | ||| || | | |||| | || Sbjct 8711649 AAGCGTTATCCGGAATGATTGGACGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCCACCGT 8711590 Query 123 GAAATCCCCGGGCTTAACC 141 |||||| ||||| |||| Sbjct 8711589 CAAATCCTAGGGCTCAACC 8711571 >seq2 Length=64235786 Score = 78.8 bits (86), Expect = 2e-12 Identities = 67/83 (81%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 11 GAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTA 70 ||||||||| || |||||| ||||||||| | | |||||||| ||| ||||||||||| Sbjct 1970390 GAATAAGCATCGACTAACTCTGTGCCAGCAACTGTGGTAATACAGAGGATGCAAGCGTTA 1970449 Query 71 ATCGGAATTACTGGGCGTAAAGC 93 || || | |||||||||||| Sbjct 1970450 TCCGAGATGATTGGGCGTAAAGC 1970472 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289536151904