Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eucalyptus_20grandis_20[refseq_20GCF_5F000612305.1_202014-05-02]
4,951 sequences; 691,429,809 total letters
Query= AAMG01000538.1
Length=248
Score E
Sequences producing significant alignments: (Bits) Value
seq4951 141 1e-31
seq9 118 1e-24
seq2 114 2e-23
seq3 105 9e-21
seq10 87.8 2e-15
seq5 82.4 1e-13
seq708 78.8 1e-12
seq1 75.2 2e-11
>seq4951
Length=160137
Score = 141 bits (156), Expect = 1e-31
Identities = 177/243 (73%), Gaps = 20/243 (8%)
Strand=Plus/Minus
Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65
|||||| ||| ||||||||||||| || |||||| | ||||| | ||| || ||||
Sbjct 111314 CCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTAC-GACTTTGCGGAGACC 111256
Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125
||||||||| |||||||||||| || || |||||||| ||
Sbjct 111255 TGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCT------------- 111209
Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185
| || || || ||||||||||||||||||||||||||| |||||||||| |||||
Sbjct 111208 TTGTG----AGGAG--GCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCT 111155
Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245
|| | |||| | || | ||| ||||||||||||| |||||||||||||||| |
Sbjct 111154 TAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCACCTGTGTCGGTTTCGG 111095
Query 246 GTA 248
|||
Sbjct 111094 GTA 111092
Score = 141 bits (156), Expect = 1e-31
Identities = 177/243 (73%), Gaps = 20/243 (8%)
Strand=Plus/Plus
Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65
|||||| ||| ||||||||||||| || |||||| | ||||| | ||| || ||||
Sbjct 137696 CCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTAC-GACTTTGCGGAGACC 137754
Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125
||||||||| |||||||||||| || || |||||||| ||
Sbjct 137755 TGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCT------------- 137801
Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185
| || || || ||||||||||||||||||||||||||| |||||||||| |||||
Sbjct 137802 TTGTG----AGGAG--GCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCT 137855
Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245
|| | |||| | || | ||| ||||||||||||| |||||||||||||||| |
Sbjct 137856 TAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCACCTGTGTCGGTTTCGG 137915
Query 246 GTA 248
|||
Sbjct 137916 GTA 137918
>seq9
Length=39018107
Score = 118 bits (130), Expect = 1e-24
Identities = 172/243 (71%), Gaps = 20/243 (8%)
Strand=Plus/Minus
Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65
|||||| ||| ||||||||||||| || |||||| | ||||| | ||| || |||
Sbjct 28485679 CCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTAC-GACTTTGCGGAGACT 28485621
Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125
||||||||| ||||| |||||| || || |||||||| ||
Sbjct 28485620 TGTGTTTTTGGTAAATAGTCGCCCGGGCCTGGTCACTGCGACCCCCT------------- 28485574
Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185
| || || || ||||||||||||| ||||||| ||||| |||||||||| |||||
Sbjct 28485573 TTGTG----AGGAG--GCACCCCTTCTCCTGAAGTTATGGGGCTATTTTGCCGAGTTCCT 28485520
Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245
| | |||| | || | ||| ||||||||||||| |||||||||||||||| |
Sbjct 28485519 CAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCACCTGTGTCGGTTTCGG 28485460
Query 246 GTA 248
|||
Sbjct 28485459 GTA 28485457
Score = 77.0 bits (84), Expect = 5e-12
Identities = 45/47 (96%), Gaps = 0/47 (0%)
Strand=Plus/Minus
Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTA 187
|||||||||||||||||||||||||||| |||||||||| |||||||
Sbjct 26369258 GGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTA 26369212
Score = 75.2 bits (82), Expect = 2e-11
Identities = 80/103 (78%), Gaps = 2/103 (2%)
Strand=Plus/Minus
Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACC 200
|||||||||||| || |||| | | ||| |||||||||| ||||||| | |||| |
Sbjct 8344863 GGCACCCCTTCTTCCAAAGTGATGAGGCTATTTTGCCGAGTTCCTTAGAGAGAGTTGTCT 8344804
Query 201 CGAACGCCTTA-GTATTCTCTACCTGACCACCTGTGTCGGTTT 242
|| | ||||| |||| || ||||| |||||||||| |||||
Sbjct 8344803 CGTGC-CCTTATGTATGCTATACCTACCCACCTGTGTTGGTTT 8344762
>seq2
Length=64235786
Score = 114 bits (126), Expect = 2e-23
Identities = 90/108 (83%), Gaps = 0/108 (0%)
Strand=Plus/Minus
Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACC 200
|||||||||||||||||||||||||||| |||||||||| ||||||| | |||| |
Sbjct 55173695 GGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTAGAGAGAGTTGTCT 55173636
Query 201 CGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248
|| | ||| ||||||||||||| |||||||||||||||| ||||
Sbjct 55173635 CGTGCCCCTAGGTATTCTCTACCTACCCACCTGTGTCGGTTTCGGGTA 55173588
Score = 100 bits (110), Expect = 4e-19
Identities = 87/108 (81%), Gaps = 0/108 (0%)
Strand=Plus/Minus
Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACC 200
||||||||||||||||||||||| |||| |||||||||| ||||||| | |||| |
Sbjct 6694941 GGCACCCCTTCTCCCGAAGTTACTGGGCTATTTTGCCGAGTTCCTTAGAGAGAGTTGTCT 6694882
Query 201 CGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248
|| | ||| ||||||||||||| |||||| ||||| ||| ||||
Sbjct 6694881 CGCGCTCCTAGGTATTCTCTACCTACCCACCTATGTCGATTTCGGGTA 6694834
>seq3
Length=80079441
Score = 105 bits (116), Expect = 9e-21
Identities = 169/243 (70%), Gaps = 20/243 (8%)
Strand=Plus/Plus
Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65
|||||| ||| |||||||||||| || |||||| | ||||| | |||||| |||
Sbjct 56889332 CCTTCCGGCACTAGGCAGGCGTCAGCCCCCATACATGGTCTTAC-GACTTCGCGGAGACT 56889390
Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125
| ||||||| ||||| |||||| || || ||| |||| ||
Sbjct 56889391 TATGTTTTTGGTAAATAGTCGCCCGGGCCTGGTCACTGTGACCCCCT------------- 56889437
Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185
| || || || ||||||||||||||||||||||| ||| |||||||| | |||||
Sbjct 56889438 TTGTG----AGGAG--GCACCCCTTCTCCCGAAGTTACGAGGCTATTTTGCCAAGTTCCT 56889491
Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245
|| | |||| | | | ||| ||||||||||||| ||||||||||| |||| |
Sbjct 56889492 TAGAGAGAGTTGTCTCACGCCCCTAGGTATTCTCTACCTACCCACCTGTGTCAGTTTCGG 56889551
Query 246 GTA 248
|||
Sbjct 56889552 GTA 56889554
Score = 89.7 bits (98), Expect = 7e-16
Identities = 81/102 (79%), Gaps = 0/102 (0%)
Strand=Plus/Plus
Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACC 200
||||||||||||||| ||||| || || |||||||||| ||||||| | |||| |
Sbjct 62050546 GGCACCCCTTCTCCCAAAGTTGCGAGGTTATTTTGCCGAGTTCCTTAGAGAGAGTTGTCT 62050605
Query 201 CGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTT 242
|| | ||| ||||||||||||| |||||| |||||||||
Sbjct 62050606 CGCGCCCCTAGGTATTCTCTACCTACCCACCTATGTCGGTTT 62050647
Score = 89.7 bits (98), Expect = 7e-16
Identities = 81/102 (79%), Gaps = 0/102 (0%)
Strand=Plus/Plus
Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACC 200
|||||||||||||||||||||||| || |||||||||| ||||||| | |||| |
Sbjct 63227003 GGCACCCCTTCTCCCGAAGTTACGAGGTTATTTTGCCGAGTTCCTTAGAGAGAGTTGTCT 63227062
Query 201 CGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTT 242
| | ||| ||||| ||||||| |||||| |||||||||
Sbjct 63227063 CACGCCCCTAGGTATTTTCTACCTACCCACCTATGTCGGTTT 63227104
Score = 89.7 bits (98), Expect = 7e-16
Identities = 81/102 (79%), Gaps = 0/102 (0%)
Strand=Plus/Plus
Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACC 200
|||||||||||||||||||||||| || |||||| ||| |||||| | |||| |
Sbjct 66575613 GGCACCCCTTCTCCCGAAGTTACGAGGTTATTTTGTCGAGCTCCTTAGAGAGAGTTGTCT 66575672
Query 201 CGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTT 242
|| | ||| ||||||||||||| |||||| |||||||||
Sbjct 66575673 CGCGCCCCTAGGTATTCTCTACCTACCCACCTATGTCGGTTT 66575714
>seq10
Length=39358841
Score = 87.8 bits (96), Expect = 2e-15
Identities = 84/108 (78%), Gaps = 0/108 (0%)
Strand=Plus/Minus
Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACC 200
||||||||||||| ||||||||||||| |||||| || || ||| | |||| |
Sbjct 12842613 GGCACCCCTTCTCTTGAAGTTACGGGGCAATTTTGTTGAGTTTTTTAGAAAGAGTTGTCT 12842554
Query 201 CGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248
|| || ||| ||||||||||||| ||||||||||| |||| ||||
Sbjct 12842553 CGCACCCCTAGGTATTCTCTACCTACCCACCTGTGTCAGTTTCGGGTA 12842506
>seq5
Length=74729908
Score = 82.4 bits (90), Expect = 1e-13
Identities = 80/102 (78%), Gaps = 1/102 (1%)
Strand=Plus/Minus
Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACC 200
||||||| || |||| |||||||| ||| || ||||||| |||| ||| | |||| |
Sbjct 5958750 GGCACCCATT-TCCCTAAGTTACGAGGCTATCTTGCCGAGTTCCCTAAAGAAAGTTGTCT 5958692
Query 201 CGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTT 242
| || ||| ||||||||||||| |||| |||||||||||
Sbjct 5958691 CACACCCCTAGGTATTCTCTACCTACCCACATGTGTCGGTTT 5958650
>seq708
Length=43341
Score = 78.8 bits (86), Expect = 1e-12
Identities = 116/166 (70%), Gaps = 20/166 (12%)
Strand=Plus/Minus
Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65
|||||| ||| ||||||||||||| || |||||| | |||| || ||| || ||||
Sbjct 39896 CCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTA-CGACTTTGCGGAGACC 39838
Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125
||||||||| |||||||||||| || || |||||||| | |
Sbjct 39837 TGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACC-------------CCCT 39791
Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCAT 171
| || | | |||||||||||||||||||||||||||| ||
Sbjct 39790 TTGT------GAGGAGGCACCCCTTCTCCCGAAGTTACGGGGCTAT 39751
>seq1
Length=40297282
Score = 75.2 bits (82), Expect = 2e-11
Identities = 69/85 (81%), Gaps = 2/85 (2%)
Strand=Plus/Minus
Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACC 200
|||||||||||||||||||||||||||| ||||||| | |||||| | |||| |
Sbjct 34765905 GGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCTAAGTTCCTTGGAGAAAGTTGTCT 34765846
Query 201 CGAACGCCTTAG-TATTCTCTACCT 224
|| | |||||| ||||||||||||
Sbjct 34765845 CGCGC-CCTTAGGTATTCTCTACCT 34765822
Score = 75.2 bits (82), Expect = 2e-11
Identities = 69/85 (81%), Gaps = 2/85 (2%)
Strand=Plus/Minus
Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACC 200
|||||||||||||||||||||||||||| |||||| || ||||||| | |||| |
Sbjct 34766034 GGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGTTGAGTTCCTTAGAGAGAGTTGTCT 34765975
Query 201 CGAACGCCTTA-GTATTCTCTACCT 224
|| | ||||| ||||||| |||||
Sbjct 34765974 CGTGC-CCTTAGGTATTCTTTACCT 34765951
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694366694623
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