Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eucalyptus_20grandis_20[refseq_20GCF_5F000612305.1_202014-05-02]
4,951 sequences; 691,429,809 total letters
Query= AAMG01000599.1
Length=180
Score E
Sequences producing significant alignments: (Bits) Value
seq4951 87.8 2e-15
seq708 87.8 2e-15
seq7 80.6 3e-13
seq9 78.8 9e-13
seq2 75.2 1e-11
>seq4951
Length=160137
Score = 87.8 bits (96), Expect = 2e-15
Identities = 83/106 (78%), Gaps = 0/106 (0%)
Strand=Plus/Plus
Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106
||||| || |||||||| ||||||||||| |||||||||| ||| ||||| ||
Sbjct 111213 GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 111272
Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152
||| | |||| ||| |||||||||||| |||||||||||| ||
Sbjct 111273 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 111318
Score = 87.8 bits (96), Expect = 2e-15
Identities = 83/106 (78%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106
||||| || |||||||| ||||||||||| |||||||||| ||| ||||| ||
Sbjct 137797 GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 137738
Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152
||| | |||| ||| |||||||||||| |||||||||||| ||
Sbjct 137737 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 137692
>seq708
Length=43341
Score = 87.8 bits (96), Expect = 2e-15
Identities = 83/106 (78%), Gaps = 0/106 (0%)
Strand=Plus/Plus
Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106
||||| || |||||||| ||||||||||| |||||||||| ||| ||||| ||
Sbjct 39795 GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 39854
Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152
||| | |||| ||| |||||||||||| |||||||||||| ||
Sbjct 39855 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 39900
>seq7
Length=52445601
Score = 80.6 bits (88), Expect = 3e-13
Identities = 67/82 (82%), Gaps = 0/82 (0%)
Strand=Plus/Minus
Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127
||||||||||||||||||||||| ||||||| | | || ||| |||||| || |||
Sbjct 5784747 GCGACTGTTTATTAAAAACACAGGACTCTGCTAGGTGGTAACAGGATGTATAGAGTCTGA 5784688
Query 128 CGCCTGCCCGGTGCCGGAAGGT 149
| |||||| ||||| |||||||
Sbjct 5784687 CACCTGCCAGGTGCTGGAAGGT 5784666
>seq9
Length=39018107
Score = 78.8 bits (86), Expect = 9e-13
Identities = 81/106 (76%), Gaps = 0/106 (0%)
Strand=Plus/Plus
Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106
||||| || |||||||| |||||| |||| ||||||||| ||| ||||| ||
Sbjct 28485578 GGTCGCAGTGACCAGGCCCGGGCGACTATTTACCAAAAACACAAGTCTCCGCAAAGTCGT 28485637
Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152
||| | |||| ||| |||||||||||| |||||||||||| ||
Sbjct 28485638 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 28485683
>seq2
Length=64235786
Score = 75.2 bits (82), Expect = 1e-11
Identities = 80/106 (75%), Gaps = 0/106 (0%)
Strand=Plus/Plus
Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106
||||| || ||||||| ||||||||||| |||||||||| ||| |||| |
Sbjct 31854643 GGTCGCAGTGACCAGGCTCGGGCGACTGTTTACCAAAAACACAGGTCTCCACAAAGTCAT 31854702
Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152
||| | |||| ||| |||||||||||| |||||||||||| ||
Sbjct 31854703 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 31854748
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476777131331
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |