Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eucalyptus_20grandis_20[refseq_20GCF_5F000612305.1_202014-05-02]
4,951 sequences; 691,429,809 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq4951 269 7e-70
seq9 127 5e-27
seq5 122 2e-25
seq3 122 2e-25
seq10 98.7 3e-18
seq708 95.1 3e-17
seq7 95.1 3e-17
seq2 93.3 1e-16
seq153 84.2 6e-14
seq4 75.2 3e-11
seq1 75.2 3e-11
>seq4951
Length=160137
Score = 269 bits (298), Expect = 7e-70
Identities = 308/418 (74%), Gaps = 27/418 (6%)
Strand=Plus/Minus
Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72
|||||||||||| || || ||||||| |||| || ||||||| ||| ||||||
Sbjct 111504 GCATCTTCACAGACATGTCTATTTCACCGAGTTTCTCTCCGAGACAGTGCCCAGATCGTT 111445
Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132
||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 111444 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 111385
Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCT----TCGCGTTAGCTAACCC 188
| ||||||||||||||| |||||||||||| || ||| | | | || | |||
Sbjct 111384 TAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTCCCCTGTCATCAGGTCACCA 111325
Query 189 CATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTT 248
| || |||||||||||| |||||||||||| ||| |||| | ||| || |||
Sbjct 111324 ACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTT 111265
Query 249 GCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGAG 308
|| ||| |||||||||| ||||||||||| |||||||| || |||||
Sbjct 111264 GCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACC------CC 111211
Query 309 CTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTT 368
||| ||| | ||| | ||||||||||||||||||| || ||
Sbjct 111210 CTTTGTGAGGA-----------------GGCACCCCTTCTCCCGAAGTTACGGGGCTATT 111168
Query 369 TTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCCAACCAC 426
||||| |||||||| ||||| |||| || ||| ||||||||||||| | ||||
Sbjct 111167 TTGCCGAGTTCCTTAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCAC 111110
Score = 269 bits (298), Expect = 7e-70
Identities = 308/418 (74%), Gaps = 27/418 (6%)
Strand=Plus/Plus
Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72
|||||||||||| || || ||||||| |||| || ||||||| ||| ||||||
Sbjct 137506 GCATCTTCACAGACATGTCTATTTCACCGAGTTTCTCTCCGAGACAGTGCCCAGATCGTT 137565
Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132
||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 137566 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 137625
Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCT----TCGCGTTAGCTAACCC 188
| ||||||||||||||| |||||||||||| || ||| | | | || | |||
Sbjct 137626 TAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTCCCCTGTCATCAGGTCACCA 137685
Query 189 CATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTT 248
| || |||||||||||| |||||||||||| ||| |||| | ||| || |||
Sbjct 137686 ACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTT 137745
Query 249 GCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGAG 308
|| ||| |||||||||| ||||||||||| |||||||| || |||||
Sbjct 137746 GCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACC------CC 137799
Query 309 CTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTT 368
||| ||| | ||| | ||||||||||||||||||| || ||
Sbjct 137800 CTTTGTGAGGA-----------------GGCACCCCTTCTCCCGAAGTTACGGGGCTATT 137842
Query 369 TTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCCAACCAC 426
||||| |||||||| ||||| |||| || ||| ||||||||||||| | ||||
Sbjct 137843 TTGCCGAGTTCCTTAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCAC 137900
>seq9
Length=39018107
Score = 127 bits (140), Expect = 5e-27
Identities = 193/274 (70%), Gaps = 12/274 (4%)
Strand=Plus/Plus
Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66
||||| ||||||||||| || ||||||||||||| || | | || || || | ||
Sbjct 15382294 TACACCGCATCTTCACAAAGAATTCAATTTCACTGGGTTTATGTTGAAGGCAACAGGGCA 15382353
Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126
||||||| ||||| ||||||||| ||||| ||| |||||||||||||||||||||
Sbjct 15382354 GTCGTTACACCATTTGTGCAGGTCACTACTTATATGACCAGGAATTTCGCTACCTTAGGA 15382413
Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAAC 186
|||| ||||| ||| | ||||| |||||| || | ||||| |||
Sbjct 15382414 TAGTTAAAGTTACTGCCACTGTTTATGTTGGCTTCCATTCAAAGCTT--------ATAA- 15382464
Query 187 CCCATCAATT---AACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCG 243
| | || || ||||||| ||||| ||| | || | | || |||| || | |
Sbjct 15382465 CACTTCTCTTTCCGACCTTCCAGCACCAAGCAAGTGTTATAGCCCATACATCGTGTCACC 15382524
Query 244 TGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTC 277
|| ||||||| | ||||||| |||||||||||
Sbjct 15382525 ACTTAGCAGAGTCCCGTGTTTTCAATAAACAGTC 15382558
Score = 125 bits (138), Expect = 2e-26
Identities = 165/229 (72%), Gaps = 20/229 (9%)
Strand=Plus/Minus
Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126
||||||||||| ||| ||| |||| ||||||||| ||||||||||||||||||||| |||
Sbjct 28431889 ATCGTTACGCCTTTCATGCGGGTCAGAACTTACCTGACAAGGAATTTCGCTACCTTTGGA 28431830
Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGC--------------- 171
|||| | ||||||||||||||| || ||||||| || ||| |
Sbjct 28431829 TCGTTCTAGTTACGGCCGCCGTTCACTCGGGCTTCAATTCAGAACGTAACTAATTTTTTT 28431770
Query 172 TTCGCGTTAGCTAACCCCATCAATTAACCTTCCGGCAC-CGGGCAGGCGTCACACCCTAT 230
||| |||| || ||| | |||||||| |||| ||||||| ||| | ||||
Sbjct 28431769 TTCTTTTTAGTGAATCCCTCCTCTTAACCTTAGAGCACTGGGGCAGGTGTCGCCCCCT-- 28431712
Query 231 ACGTCCA-CTTTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278
| | | ||| || || ||| || ||||||||||| | |||||||||
Sbjct 28431711 -CCTATAGCTTGCGCCTTAGCATAGAGCTGTGTTTTTGAGAAACAGTCG 28431664
Score = 113 bits (124), Expect = 1e-22
Identities = 205/297 (69%), Gaps = 6/297 (2%)
Strand=Plus/Minus
Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66
||| | ||||||||||| || || ||||||| ||| || |||| | ||
Sbjct 8345172 TACTCCGCATCTTCACAAACATGTCTATTTCACA-AGTTTCTCTCCGAGATGGTACCTAG 8345114
Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126
|||||||| || |||||||||||||||||||| ||||||||||||| ||| ||||||
Sbjct 8345113 ATCGTTACACCTTTCGTGCAGGTCGGAACTTATATGACAAGGAATTTCACTAATTTAGGA 8345054
Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCT----TCGCGTTAGC 182
| ||||| |||| | || || || ||||||||| ||| ||| | | ||||
Sbjct 8345053 CTGTTATAGTTATGATTGCTATTCACTGGGGCTTCGGTCACTGGCTTTACTATCATTAGG 8344994
Query 183 TAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTC 242
| ||| | || |||||||| ||| || || |||| ||||| || | | ||
Sbjct 8344993 TCACCAACTTCCTTGACCTTCCGACACTAGGTTGGTGTCAGCCCCTACACATGGTC-TTA 8344935
Query 243 GTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGAC 299
| |||||| || || ||||||| |||||| || | ||| |||| || ||||
Sbjct 8344934 GACTTTGCAAAGACCTATGTTTTTGGTAAACAATCTCTTAGGCTTGGTCACTGCGAC 8344878
Score = 93.3 bits (102), Expect = 1e-16
Identities = 157/232 (68%), Gaps = 23/232 (10%)
Strand=Plus/Minus
Query 195 TTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAG 254
|| |||||||||||| |||||||||||| ||| |||| | ||| || ||||| |||
Sbjct 28485683 TTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTTGCGGAG 28485624
Query 255 TGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGAGCTTACG 314
||||||||| |||| |||||| |||||||| || ||||| |||
Sbjct 28485623 ACTTGTGTTTTTGGTAAATAGTCGCCCGGGCCTGGTCACTGCGACC------CCCTTTGT 28485570
Query 315 GAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTTTTGCCT 374
||| | ||| | |||||||| ||||||| || || |||||||
Sbjct 28485569 GAGGA-----------------GGCACCCCTTCTCCTGAAGTTATGGGGCTATTTTGCCG 28485527
Query 375 AGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCCAACCAC 426
||||||| ||||| |||| || ||| ||||||||||||| | ||||
Sbjct 28485526 AGTTCCTCAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCAC 28485475
>seq5
Length=74729908
Score = 122 bits (134), Expect = 2e-25
Identities = 164/228 (72%), Gaps = 8/228 (4%)
Strand=Plus/Minus
Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72
||||||||||| || || |||| | |||| || ||| || | | ||||||
Sbjct 13676168 GCATCTTCACAAACATATCTATTTTATCGAGTTTCTCTCAAAGAGAGTGGCCAGATCGTT 13676109
Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132
| ||| ||| |||| |||||||||||||| || ||||||||| |||||||| ||||||||
Sbjct 13676108 ATGCCTTTCATGCAAGTCGGAACTTACCCTACTAGGAATTTCACTACCTTAAGACCGTTA 13676049
Query 133 TTGTTA----CGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCT----TCGCGTTAGCTA 184
| ||| || |||||||| || ||||||||||| | || | | |||| |
Sbjct 13676048 TAATTATGGCCGCCCGCCGTTCACTAGGGCTTCGATCGCTAACTCTCCTATCATTAGGTC 13675989
Query 185 ACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATAC 232
||| | |||||||||| |||| ||||| |||||| ||| ||||
Sbjct 13675988 ACCAACTTTCTTAACCTTCCAGCACTGGGCAAGCGTCAATCCCCATAC 13675941
Score = 75.2 bits (82), Expect = 3e-11
Identities = 62/76 (82%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 33 ATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTACGCCATTCGTGCAGGTCGG 92
||||||| |||| || ||||||| ||| ||||||||||| ||||||| ||| ||
Sbjct 68553999 ATTTCACCGAGTTTCTCTCCGAGACAGTGCCTAGATCGTTACGCCTTTCGTGCGGGTTGG 68553940
Query 93 AACTTACCCGACAAGG 108
||||||||||||||||
Sbjct 68553939 AACTTACCCGACAAGG 68553924
>seq3
Length=80079441
Score = 122 bits (134), Expect = 2e-25
Identities = 160/220 (73%), Gaps = 15/220 (7%)
Strand=Plus/Minus
Query 77 CATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATTGT 136
|| |||||| ||||| | ||| ||||||||||||||| ||||||||||| |||| ||
Sbjct 19561312 CACTCGTGCGGGTCGCTAATTATGCGACAAGGAATTTCGATACCTTAGGACAGTTAGAGT 19561253
Query 137 TACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTT----CGCGTTAGCTAACCCCATC 192
||| | |||| |||||||||||||| || | ||||| | | || || ||
Sbjct 19561252 TACTGTCGCCATTTACCGGGGCTTCCATTCAAAGCTTATGACACTTTTTCT-------TC 19561200
Query 193 AATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAG 252
| ||||||| ||| ||||| | ||| ||| |||||| || || | || |||
Sbjct 19561199 ---TGACCTTCCAACACTGGGCAAGTGTCGCACTCTATACATCGTGTTACCACTTAGCAA 19561143
Query 253 AGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTAT 292
||| ||||||||||||||||||||| | | ||||||||
Sbjct 19561142 AGTCCTGTGTTTTTAATAAACAGTCACTAC-CCCTGGTAT 19561104
Score = 100 bits (110), Expect = 7e-19
Identities = 272/417 (65%), Gaps = 36/417 (9%)
Strand=Plus/Plus
Query 16 TCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTACG 75
||||||||| || || ||||||| |||| || ||||||| ||| ||| |||||
Sbjct 56889150 TCTTCACAGACATGTCTATTTCACCGAGTTTCTCTCTGAGACAGTGCCCAAATCATTACG 56889209
Query 76 CCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC--CGTTAT 133
| ||||||| |||| ||||||||||| || | || | ||| | | ||
Sbjct 56889210 CT-TTCGTGCGGGTCATAACTTACCCGATAACGGATATAAG------AGGTCGACTCTAG 56889262
Query 134 TGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTT----AGCTAACCCC 189
| | ||||||| |||| ||||||| || ||| | | | || | |||
Sbjct 56889263 AGGATCCCTCGCCGTTCACCGAGGCTTCGGTCGCCGGCTCCCCTGTCATCAGGTCACCAA 56889322
Query 190 ATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTG 249
| || |||||||||||| ||||||||||| ||| |||| | ||| || || |
Sbjct 56889323 CTTCTTTGACCTTCCGGCACTAGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTCG 56889382
Query 250 CAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGAGC 309
| ||| | ||||||| |||| |||||| |||||||| || |||| |
Sbjct 56889383 CGGAGACTTATGTTTTTGGTAAATAGTCGCCCGGGCCTGGTCACTGTGACCCCC------ 56889436
Query 310 TTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTTT 369
|| ||| | | |||| |||||||||||||||||| || |||
Sbjct 56889437 TTTGTGAGGAGG-----------CACC------CCTTCTCCCGAAGTTACGAGGCTATTT 56889479
Query 370 TGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCCAACCAC 426
|||| |||||||| ||||| ||||| || ||| ||||||||||||| | ||||
Sbjct 56889480 TGCCAAGTTCCTTAGAGAGAGTTGTCTCACGCCCCTAGGTATTCTCTACCTACCCAC 56889536
Score = 73.4 bits (80), Expect = 1e-10
Identities = 70/90 (78%), Gaps = 0/90 (0%)
Strand=Plus/Plus
Query 337 GGCGCACCTTCTCCCGAAGTTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCT 396
||| | |||||||||||||||||| | ||||||| |||||||| ||||| |||
Sbjct 63227003 GGCACCCCTTCTCCCGAAGTTACGAGGTTATTTTGCCGAGTTCCTTAGAGAGAGTTGTCT 63227062
Query 397 CAAGCGCCTTGGTATTCTCTACCCAACCAC 426
|| || ||| |||||| |||||| | ||||
Sbjct 63227063 CACGCCCCTAGGTATTTTCTACCTACCCAC 63227092
>seq10
Length=39358841
Score = 98.7 bits (108), Expect = 3e-18
Identities = 119/162 (73%), Gaps = 0/162 (0%)
Strand=Plus/Plus
Query 5 GATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCG 64
|||| | ||||||| |||| || || |||| || ||| | | |||| | |||
Sbjct 19346267 GATAGTCCGCATCTTTACAGACATGTCTATTTTACCAAGTTTTTCTTTGAGATGGTGCCC 19346326
Query 65 CCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAG 124
|| ||| |||| ||| || ||||||||||||| | ||||| ||||| |||||||||
Sbjct 19346327 AAATTGTTTCGCCTTTCATGAGGGTCGGAACTTACTCAACAAGAAATTTTCCTACCTTAG 19346386
Query 125 GACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCA 166
||| |||| ||||| ||||||||| ||| || ||| | |||
Sbjct 19346387 AACCATTATAGTTACAGCCGCCGTTCACCTGGACTTTGGTCA 19346428
>seq708
Length=43341
Score = 95.1 bits (104), Expect = 3e-17
Identities = 122/168 (73%), Gaps = 4/168 (2%)
Strand=Plus/Minus
Query 137 TACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTT----AGCTAACCCCATC 192
||||||||||||| |||||||||||| || || | | | || | ||| |
Sbjct 39962 TACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGACTCCCCTGTCATCAGGTCACCAACTT 39903
Query 193 AATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAG 252
|| |||||||||||| |||||||||||| ||| |||| | ||| || ||||| |
Sbjct 39902 CCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTTGCGG 39843
Query 253 AGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACC 300
|| |||||||||| ||||||||||| |||||||| || |||||
Sbjct 39842 AGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACC 39795
>seq7
Length=52445601
Score = 95.1 bits (104), Expect = 3e-17
Identities = 116/157 (74%), Gaps = 6/157 (4%)
Strand=Plus/Plus
Query 123 AGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGC 182
||||| |||| ||||| |||||||||||| |||||||| || | ||||| || |
Sbjct 5784597 AGGACAGTTAGAGTTACTGCCGCCGTTTACTGGGGCTTCCATTCAAAGCTTA----TAAC 5784652
Query 183 TAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTC 242
|| | | ||||||| ||||| |||||| |||| || |||||| ||| || |
Sbjct 5784653 --ACTTCTCCTTCCGACCTTCCAGCACCTGGCAGGTGTCAGACTCTATACATCCTGTTAC 5784710
Query 243 GTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGC 279
| ||||||| |||||||||||||||||||||||
Sbjct 5784711 CACCTAGCAGAGTCCTGTGTTTTTAATAAACAGTCGC 5784747
>seq2
Length=64235786
Score = 93.3 bits (102), Expect = 1e-16
Identities = 198/297 (67%), Gaps = 28/297 (9%)
Strand=Plus/Minus
Query 135 GTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTT----AGCTAACCC-C 189
|||| |||||||||| ||||||||||| || ||| | | || || | ||| |
Sbjct 6695125 GTTATGGCCGCCGTTCACCGGGGCTTCAGTCTCTGGCTCCCCTTTCATCAGGTCACCAAC 6695066
Query 190 ATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTG 249
|| || |||||||||||| ||||| |||| | ||| |||| | || | ||||
Sbjct 6695065 TTCCTTTGACCTTCCGGCACTGGGCAAGCGTTAGCCCCCATACATGGTCTCATGACTTTG 6695006
Query 250 CAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGAGC 309
| ||| ||||||||| ||||||||||| ||||||| || |||| |
Sbjct 6695005 CGGAGACTTGTGTTTTTGGTAAACAGTCGCCCGAGCCTGGTCACTGTGACCCCC------ 6694952
Query 310 TTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTTT 369
|| ||| | | |||| ||||||||||||||||| | || |||
Sbjct 6694951 TTTGTGAGAAGG-----------CACC------CCTTCTCCCGAAGTTACTGGGCTATTT 6694909
Query 370 TGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCCAACCAC 426
|||| |||||||| ||||| |||| || ||| ||||||||||||| | ||||
Sbjct 6694908 TGCCGAGTTCCTTAGAGAGAGTTGTCTCGCGCTCCTAGGTATTCTCTACCTACCCAC 6694852
Score = 82.4 bits (90), Expect = 2e-13
Identities = 72/90 (80%), Gaps = 0/90 (0%)
Strand=Plus/Minus
Query 337 GGCGCACCTTCTCCCGAAGTTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCT 396
||| | ||||||||||||||||||| || ||||||| |||||||| ||||| |||
Sbjct 55173695 GGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTAGAGAGAGTTGTCT 55173636
Query 397 CAAGCGCCTTGGTATTCTCTACCCAACCAC 426
| || ||| ||||||||||||| | ||||
Sbjct 55173635 CGTGCCCCTAGGTATTCTCTACCTACCCAC 55173606
Score = 75.2 bits (82), Expect = 3e-11
Identities = 80/106 (75%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 195 TTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAG 254
|| |||||||||||| |||||||||||| ||| |||| | ||| | |||| |||
Sbjct 31854748 TTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTATGACTTTGTGGAG 31854689
Query 255 TGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACC 300
|||||||||| ||||||||||| ||||||| || |||||
Sbjct 31854688 ACCTGTGTTTTTGGTAAACAGTCGCCCGAGCCTGGTCACTGCGACC 31854643
>seq153
Length=185566
Score = 84.2 bits (92), Expect = 6e-14
Identities = 61/71 (86%), Gaps = 0/71 (0%)
Strand=Plus/Minus
Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126
||||||||||| ||||||| || |||||||||| ||||||||||||| ||||| || ||
Sbjct 145382 ATCGTTACGCCTTTCGTGCCAGTTGGAACTTACCTGACAAGGAATTTCACTACCATAAGA 145323
Query 127 CCGTTATTGTT 137
||| ||| |||
Sbjct 145322 CCGGTATAGTT 145312
>seq4
Length=41978195
Score = 75.2 bits (82), Expect = 3e-11
Identities = 83/111 (75%), Gaps = 0/111 (0%)
Strand=Plus/Plus
Query 14 CATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTA 73
||| |||||| || || |||| ||| ||| || ||| || || |||||||
Sbjct 15682897 CATTTTCACAAATATGTCTATTTGACTAAGTTTCACTCCAAGATAGTGCACAGATCGTTA 15682956
Query 74 CGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAG 124
||| ||||||| ||| |||| ||||||||||||||||||| |||||| ||
Sbjct 15682957 TGCCTTTCGTGCGGGTTGGAATTTACCCGACAAGGAATTTCACTACCTGAG 15683007
>seq1
Length=40297282
Score = 75.2 bits (82), Expect = 3e-11
Identities = 135/194 (70%), Gaps = 5/194 (3%)
Strand=Plus/Plus
Query 88 GTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATTGTTACGGCCGCCG 147
|||||||||||| | |||||||||| |||| ||||||| |||||| |||| |||| |||
Sbjct 34840446 GTCGGAACTTACTCAACAAGGAATTATGCTATCTTAGGATCGTTATAGTTATGGCCACCG 34840505
Query 148 TTTACCGGGGCTTCGATCA-AGA---GCTTCGCGTTAGCTAACCCCATCAATTAACCTTC 203
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Sbjct 34840506 TTCACTAGCGTTTCGGTTACCGACTTCCTTATCATTGGGTTACCAACTTTCTTGACCTTT 34840565
Query 204 CGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAGTGCTGTGTT 263
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Sbjct 34840566 CGGTACTGGATAAGCGTCA-ACCCCATACATGGTCTTACAACTTTGCGGATATCTATGTT 34840624
Query 264 TTTAATAAACAGTC 277
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Sbjct 34840625 TTTGGTAAACAATC 34840638
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1260737577792
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |