Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eucalyptus_20grandis_20[refseq_20GCF_5F000612305.1_202014-05-02]
4,951 sequences; 691,429,809 total letters
Query= AAMG01000750.1
Length=102
Score E
Sequences producing significant alignments: (Bits) Value
seq2 84.2 1e-14
seq7 80.6 1e-13
>seq2
Length=64235786
Score = 84.2 bits (92), Expect = 1e-14
Identities = 54/59 (92%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
||||||||||||||| ||||||||| |||||||||||| |||| ||||||||||||||
Sbjct 26405968 GGAAAAGAAACTAACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAAGAGCCCAGC 26405910
Score = 84.2 bits (92), Expect = 1e-14
Identities = 54/59 (92%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
||||||||||||||| ||||||||| |||||||||||| |||| ||||||||||||||
Sbjct 26443585 GGAAAAGAAACTAACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAAGAGCCCAGC 26443527
Score = 84.2 bits (92), Expect = 1e-14
Identities = 54/59 (92%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
||||||||||||||| ||||||||| |||||||||||| |||| ||||||||||||||
Sbjct 26463389 GGAAAAGAAACTAACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAAGAGCCCAGC 26463447
Score = 80.6 bits (88), Expect = 1e-13
Identities = 52/56 (93%), Gaps = 1/56 (2%)
Strand=Plus/Minus
Query 4 AAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
|||||||||||| |||||||||| |||||||||||| |||| ||||||||||||||
Sbjct 26396313 AAAGAAACTAACAAGGATTCCCT-AGTAACGGCGAGCGAACCGGGAAGAGCCCAGC 26396259
Score = 80.6 bits (88), Expect = 1e-13
Identities = 53/59 (90%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
||||||||||||||| ||||||||| |||||||||||| |||| |||||||||| |||
Sbjct 26557235 GGAAAAGAAACTAACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAAGAGCCTAGC 26557177
>seq7
Length=52445601
Score = 80.6 bits (88), Expect = 1e-13
Identities = 53/59 (90%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
||||||||||||||| ||||||||| |||||||||||| |||| | ||||||||||||
Sbjct 37652879 GGAAAAGAAACTAACAAGGATTCCCCTAGTAACGGCGAGCGAACCGAGAAGAGCCCAGC 37652937
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 230389305840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |