Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eucalyptus_20grandis_20[refseq_20GCF_5F000612305.1_202014-05-02]
4,951 sequences; 691,429,809 total letters
Query= AAMG01001138.1
Length=202
Score E
Sequences producing significant alignments: (Bits) Value
seq4951 105 7e-21
seq9 75.2 1e-11
>seq4951
Length=160137
Score = 105 bits (116), Expect = 7e-21
Identities = 113/152 (74%), Gaps = 6/152 (4%)
Strand=Plus/Minus
Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84
|||||||| |||| || |||| || |||||||||| || | | ||||||| |||
Sbjct 111533 GGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 111474
Query 85 ---CTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACC 141
||| | | |||||| ||| || ||||||| ||||||||||||||
Sbjct 111473 TTTCTCTCCG---AGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACC 111417
Query 142 CGACAAGGAATTTCGCTACCTTAGGACCGTTA 173
||||||||||||||||||||||||||||||||
Sbjct 111416 CGACAAGGAATTTCGCTACCTTAGGACCGTTA 111385
Score = 105 bits (116), Expect = 7e-21
Identities = 113/152 (74%), Gaps = 6/152 (4%)
Strand=Plus/Plus
Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84
|||||||| |||| || |||| || |||||||||| || | | ||||||| |||
Sbjct 137477 GGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 137536
Query 85 ---CTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACC 141
||| | | |||||| ||| || ||||||| ||||||||||||||
Sbjct 137537 TTTCTCTCCG---AGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACC 137593
Query 142 CGACAAGGAATTTCGCTACCTTAGGACCGTTA 173
||||||||||||||||||||||||||||||||
Sbjct 137594 CGACAAGGAATTTCGCTACCTTAGGACCGTTA 137625
>seq9
Length=39018107
Score = 75.2 bits (82), Expect = 1e-11
Identities = 53/61 (87%), Gaps = 0/61 (0%)
Strand=Plus/Minus
Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172
|||||| |||||||||||||||||||| ||||||||||||| ||| ||||||| |||
Sbjct 8345108 TACACCTTTCGTGCAGGTCGGAACTTATATGACAAGGAATTTCACTAATTTAGGACTGTT 8345049
Query 173 A 173
|
Sbjct 8345048 A 8345048
Score = 73.4 bits (80), Expect = 4e-11
Identities = 52/60 (87%), Gaps = 0/60 (0%)
Strand=Plus/Minus
Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172
||| || ||| ||| |||| ||||||||| ||||||||||||||||||||| ||| ||||
Sbjct 28431884 TACGCCTTTCATGCGGGTCAGAACTTACCTGACAAGGAATTTCGCTACCTTTGGATCGTT 28431825
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547173754749
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |