Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eucalyptus_20grandis_20[refseq_20GCF_5F000612305.1_202014-05-02]
4,951 sequences; 691,429,809 total letters
Query= AAMG01001382.1
Length=124
Score E
Sequences producing significant alignments: (Bits) Value
seq2 75.2 7e-12
seq17 71.6 8e-11
seq10 71.6 8e-11
seq9 71.6 8e-11
>seq2
Length=64235786
Score = 75.2 bits (82), Expect = 7e-12
Identities = 56/63 (89%), Gaps = 2/63 (3%)
Strand=Plus/Plus
Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121
|||| ||||||| | ||||||||||| |||||||||||||||||||||| | |||||| |
Sbjct 26406785 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 26406842
Query 122 GCT 124
|||
Sbjct 26406843 GCT 26406845
Score = 75.2 bits (82), Expect = 7e-12
Identities = 56/63 (89%), Gaps = 2/63 (3%)
Strand=Plus/Plus
Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121
|||| ||||||| | ||||||||||| |||||||||||||||||||||| | |||||| |
Sbjct 26444402 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 26444459
Query 122 GCT 124
|||
Sbjct 26444460 GCT 26444462
Score = 71.6 bits (78), Expect = 8e-11
Identities = 56/63 (89%), Gaps = 3/63 (5%)
Strand=Plus/Plus
Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121
||||| |||||| | ||||||||||| |||||||||||||||||||||| | |||||| |
Sbjct 26397113 TTCAT-CGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 26397169
Query 122 GCT 124
|||
Sbjct 26397170 GCT 26397172
>seq17
Length=836409
Score = 71.6 bits (78), Expect = 8e-11
Identities = 55/63 (87%), Gaps = 2/63 (3%)
Strand=Plus/Minus
Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121
|||| ||||||| | |||||||||| |||||||||||||||||||||| | |||||| |
Sbjct 22330 TTCAATCGGTAGGA-GCGACGGGCGATGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 22273
Query 122 GCT 124
|||
Sbjct 22272 GCT 22270
>seq10
Length=39358841
Score = 71.6 bits (78), Expect = 8e-11
Identities = 55/63 (87%), Gaps = 2/63 (3%)
Strand=Plus/Plus
Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121
|||| | ||||| | ||||||||||| |||||||||||||||||||||| | |||||| |
Sbjct 16383933 TTCAATTGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 16383990
Query 122 GCT 124
|||
Sbjct 16383991 GCT 16383993
>seq9
Length=39018107
Score = 71.6 bits (78), Expect = 8e-11
Identities = 55/63 (87%), Gaps = 2/63 (3%)
Strand=Plus/Minus
Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121
|||| | ||||| | ||||||||||| |||||||||||||||||||||| | |||||| |
Sbjct 33905003 TTCAATTGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 33904946
Query 122 GCT 124
|||
Sbjct 33904945 GCT 33904943
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 300786038180
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |