Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eucalyptus_20grandis_20[refseq_20GCF_5F000612305.1_202014-05-02]
4,951 sequences; 691,429,809 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq2 80.6 3e-13
seq2594 77.0 4e-12
seq17 75.2 1e-11
>seq2
Length=64235786
Score = 80.6 bits (88), Expect = 3e-13
Identities = 78/98 (80%), Gaps = 2/98 (2%)
Strand=Plus/Plus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTAT-TCGGGCGTA 71
|||||| |||||| || | |||||| | |||| |||||||||||||| | | |||||
Sbjct 20654848 CCAACACAATAGGACCGGAA-TCCTATGATGTTATCCCATGCTAATGTATATAGAGCGTA 20654906
Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109
|| |||||||| ||||||||||| |||| |||| ||
Sbjct 20654907 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAATAG 20654944
Score = 80.6 bits (88), Expect = 3e-13
Identities = 78/98 (80%), Gaps = 2/98 (2%)
Strand=Plus/Plus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71
|||||| |||||| || | |||||| | |||| |||||||||||||| | | |||||
Sbjct 26407610 CCAACACAATAGGACCGGAA-TCCTATGATGTTATCCCATGCTAATGTATACAGAGCGTA 26407668
Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109
|| |||||||| ||||||||||| |||| |||| ||
Sbjct 26407669 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 26407706
Score = 80.6 bits (88), Expect = 3e-13
Identities = 78/98 (80%), Gaps = 2/98 (2%)
Strand=Plus/Plus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71
|||||| |||||| || | |||||| | |||| |||||||||||||| | | |||||
Sbjct 26449207 CCAACACAATAGGACCGGAA-TCCTATGATGTTATCCCATGCTAATGTATACAGAGCGTA 26449265
Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109
|| |||||||| ||||||||||| |||| |||| ||
Sbjct 26449266 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 26449303
Score = 80.6 bits (88), Expect = 3e-13
Identities = 78/98 (80%), Gaps = 2/98 (2%)
Strand=Plus/Minus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71
|||||| |||||| || | |||||| | |||| |||||||||||||| | | |||||
Sbjct 26456123 CCAACACAATAGGACCGGAA-TCCTATGATGTTATCCCATGCTAATGTATACAGAGCGTA 26456065
Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109
|| |||||||| ||||||||||| |||| |||| ||
Sbjct 26456064 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 26456027
Score = 80.6 bits (88), Expect = 3e-13
Identities = 78/98 (80%), Gaps = 2/98 (2%)
Strand=Plus/Plus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71
|||||| |||||| || | |||||| | |||| |||||||||||||| | | |||||
Sbjct 26483475 CCAACACAATAGGACCGGAA-TCCTATGATGTTATCCCATGCTAATGTATACAGAGCGTA 26483533
Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109
|| |||||||| ||||||||||| |||| |||| ||
Sbjct 26483534 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 26483571
Score = 80.6 bits (88), Expect = 3e-13
Identities = 78/98 (80%), Gaps = 2/98 (2%)
Strand=Plus/Plus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71
|||||| |||||| || | |||||| | |||| |||||||||||||| | | |||||
Sbjct 26497718 CCAACACAATAGGACCGGAA-TCCTATGATGTTATCCCATGCTAATGTATACAGAGCGTA 26497776
Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109
|| |||||||| ||||||||||| |||| |||| ||
Sbjct 26497777 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 26497814
Score = 80.6 bits (88), Expect = 3e-13
Identities = 78/98 (80%), Gaps = 2/98 (2%)
Strand=Plus/Plus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71
|||||| |||||| || | |||||| | |||| |||||||||||||||| | |||||
Sbjct 26559113 CCAACATAATAGGACCGGAA-TCCTATGATGTTATCCCATGCTAATGTATTCAGAGCGTA 26559171
Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109
|| | |||||| ||||||||||| |||| |||| ||
Sbjct 26559172 GGCTTACTTTGAGCACTCTAATTTCTTCAAAGTAACAG 26559209
Score = 78.8 bits (86), Expect = 1e-12
Identities = 77/97 (79%), Gaps = 2/97 (2%)
Strand=Plus/Plus
Query 14 CAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTAA 72
||||| |||||| || | |||||| | |||| || ||||||||||| | | |||||
Sbjct 26617640 CAACATAATAGGACCGGAA-TCCTATGATGTTATCCCGTGCTAATGTATACAGAGCGTAG 26617698
Query 73 GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109
|| | ||||||||||||||||||| |||| |||| ||
Sbjct 26617699 GCTTACTTTGAACACTCTAATTTTTTCAAAGTAATAG 26617735
Score = 78.8 bits (86), Expect = 1e-12
Identities = 77/97 (79%), Gaps = 2/97 (2%)
Strand=Plus/Plus
Query 14 CAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTAA 72
||||| |||||| || | |||||| | |||| || ||||||||||| | | |||||
Sbjct 26796737 CAACATAATAGGACCGGAA-TCCTATGATGTTATCCCGTGCTAATGTATACAGAGCGTAG 26796795
Query 73 GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109
|| | ||||||||||||||||||| |||| |||| ||
Sbjct 26796796 GCTTACTTTGAACACTCTAATTTTTTCAAAGTAATAG 26796832
Score = 75.2 bits (82), Expect = 1e-11
Identities = 77/98 (79%), Gaps = 2/98 (2%)
Strand=Plus/Plus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71
|||||| |||||| || | |||||| | |||| |||||||||||||| | | |||||
Sbjct 26520652 CCAACACAATAGGACCGGAA-TCCTATGATGTTATCCCATGCTAATGTATACAGAGCGTA 26520710
Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109
| |||||||| ||||||||||| |||| |||| ||
Sbjct 26520711 GACTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 26520748
Score = 75.2 bits (82), Expect = 1e-11
Identities = 77/98 (79%), Gaps = 2/98 (2%)
Strand=Plus/Plus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71
|||||| |||||| || | |||||| | |||| |||||||||||||| | | || ||
Sbjct 26994521 CCAACACAATAGGATCGGAA-TCCTATAATGTTATCCCATGCTAATGTATACAGAGCATA 26994579
Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109
||| | |||||| ||||||||||| |||| |||| ||
Sbjct 26994580 AGCTTACTTTGAGCACTCTAATTTCTTCAAAGTAATAG 26994617
>seq2594
Length=5334
Score = 77.0 bits (84), Expect = 4e-12
Identities = 78/99 (79%), Gaps = 2/99 (2%)
Strand=Plus/Minus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71
|||||| |||||| | | |||||| |||||| ||||||||||||| | | |||||
Sbjct 2680 CCAACACAATAGGATCAGAA-TCCTATGATATTATCTCATGCTAATGTATACAGAGCGTA 2622
Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110
|| |||||||| ||||||||||| |||| |||| |||
Sbjct 2621 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAGT 2583
>seq17
Length=836409
Score = 75.2 bits (82), Expect = 1e-11
Identities = 77/98 (79%), Gaps = 2/98 (2%)
Strand=Plus/Minus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71
|||||| |||||| || | |||||| | |||| ||||||||||||| | | |||||
Sbjct 2884 CCAACACAATAGGACCGGAA-TCCTATGATGTTATCACATGCTAATGTATACAGAGCGTA 2826
Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109
|| |||||||| ||||||||||| |||| |||| ||
Sbjct 2825 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 2788
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595171452534
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |