Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucalyptus_20grandis_20[refseq_20GCF_5F000612305.1_202014-05-02] 4,951 sequences; 691,429,809 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq2 80.6 3e-13 seq2594 77.0 4e-12 seq17 75.2 1e-11 >seq2 Length=64235786 Score = 80.6 bits (88), Expect = 3e-13 Identities = 78/98 (80%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTAT-TCGGGCGTA 71 |||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 20654848 CCAACACAATAGGACCGGAA-TCCTATGATGTTATCCCATGCTAATGTATATAGAGCGTA 20654906 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 20654907 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAATAG 20654944 Score = 80.6 bits (88), Expect = 3e-13 Identities = 78/98 (80%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 26407610 CCAACACAATAGGACCGGAA-TCCTATGATGTTATCCCATGCTAATGTATACAGAGCGTA 26407668 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 26407669 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 26407706 Score = 80.6 bits (88), Expect = 3e-13 Identities = 78/98 (80%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 26449207 CCAACACAATAGGACCGGAA-TCCTATGATGTTATCCCATGCTAATGTATACAGAGCGTA 26449265 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 26449266 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 26449303 Score = 80.6 bits (88), Expect = 3e-13 Identities = 78/98 (80%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 26456123 CCAACACAATAGGACCGGAA-TCCTATGATGTTATCCCATGCTAATGTATACAGAGCGTA 26456065 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 26456064 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 26456027 Score = 80.6 bits (88), Expect = 3e-13 Identities = 78/98 (80%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 26483475 CCAACACAATAGGACCGGAA-TCCTATGATGTTATCCCATGCTAATGTATACAGAGCGTA 26483533 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 26483534 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 26483571 Score = 80.6 bits (88), Expect = 3e-13 Identities = 78/98 (80%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 26497718 CCAACACAATAGGACCGGAA-TCCTATGATGTTATCCCATGCTAATGTATACAGAGCGTA 26497776 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 26497777 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 26497814 Score = 80.6 bits (88), Expect = 3e-13 Identities = 78/98 (80%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| || | |||||| | |||| |||||||||||||||| | ||||| Sbjct 26559113 CCAACATAATAGGACCGGAA-TCCTATGATGTTATCCCATGCTAATGTATTCAGAGCGTA 26559171 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || | |||||| ||||||||||| |||| |||| || Sbjct 26559172 GGCTTACTTTGAGCACTCTAATTTCTTCAAAGTAACAG 26559209 Score = 78.8 bits (86), Expect = 1e-12 Identities = 77/97 (79%), Gaps = 2/97 (2%) Strand=Plus/Plus Query 14 CAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTAA 72 ||||| |||||| || | |||||| | |||| || ||||||||||| | | ||||| Sbjct 26617640 CAACATAATAGGACCGGAA-TCCTATGATGTTATCCCGTGCTAATGTATACAGAGCGTAG 26617698 Query 73 GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || | ||||||||||||||||||| |||| |||| || Sbjct 26617699 GCTTACTTTGAACACTCTAATTTTTTCAAAGTAATAG 26617735 Score = 78.8 bits (86), Expect = 1e-12 Identities = 77/97 (79%), Gaps = 2/97 (2%) Strand=Plus/Plus Query 14 CAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTAA 72 ||||| |||||| || | |||||| | |||| || ||||||||||| | | ||||| Sbjct 26796737 CAACATAATAGGACCGGAA-TCCTATGATGTTATCCCGTGCTAATGTATACAGAGCGTAG 26796795 Query 73 GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || | ||||||||||||||||||| |||| |||| || Sbjct 26796796 GCTTACTTTGAACACTCTAATTTTTTCAAAGTAATAG 26796832 Score = 75.2 bits (82), Expect = 1e-11 Identities = 77/98 (79%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 26520652 CCAACACAATAGGACCGGAA-TCCTATGATGTTATCCCATGCTAATGTATACAGAGCGTA 26520710 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 | |||||||| ||||||||||| |||| |||| || Sbjct 26520711 GACTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 26520748 Score = 75.2 bits (82), Expect = 1e-11 Identities = 77/98 (79%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| || | |||||| | |||| |||||||||||||| | | || || Sbjct 26994521 CCAACACAATAGGATCGGAA-TCCTATAATGTTATCCCATGCTAATGTATACAGAGCATA 26994579 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 ||| | |||||| ||||||||||| |||| |||| || Sbjct 26994580 AGCTTACTTTGAGCACTCTAATTTCTTCAAAGTAATAG 26994617 >seq2594 Length=5334 Score = 77.0 bits (84), Expect = 4e-12 Identities = 78/99 (79%), Gaps = 2/99 (2%) Strand=Plus/Minus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| | | |||||| |||||| ||||||||||||| | | ||||| Sbjct 2680 CCAACACAATAGGATCAGAA-TCCTATGATATTATCTCATGCTAATGTATACAGAGCGTA 2622 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 || |||||||| ||||||||||| |||| |||| ||| Sbjct 2621 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAGT 2583 >seq17 Length=836409 Score = 75.2 bits (82), Expect = 1e-11 Identities = 77/98 (79%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| || | |||||| | |||| ||||||||||||| | | ||||| Sbjct 2884 CCAACACAATAGGACCGGAA-TCCTATGATGTTATCACATGCTAATGTATACAGAGCGTA 2826 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 2825 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 2788 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595171452534