Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eucalyptus_20grandis_20[refseq_20GCF_5F000612305.1_202014-05-02]
4,951 sequences; 691,429,809 total letters
Query= AAMG01002193.1
Length=560
Score E
Sequences producing significant alignments: (Bits) Value
seq4951 179 1e-42
seq9 154 5e-35
seq5 109 2e-21
seq10 107 6e-21
seq7 89.7 2e-15
seq3 89.7 2e-15
seq4 82.4 3e-13
seq2 77.0 1e-11
>seq4951
Length=160137
Score = 179 bits (198), Expect = 1e-42
Identities = 397/583 (68%), Gaps = 38/583 (7%)
Strand=Plus/Plus
Query 2 CGAGTCCGAACAGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATG 61
|||||| | ||||| | ||| ||| | | |||||||| | |||||||| |||||
Sbjct 110100 CGAGTCTTCATAGGGCAATTGTCACTGCTTATGGACCCGAACCTGGGTGATCTATCCATG 110159
Query 62 GCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATT 121
||||||||||| | ||| | || |||||||||||||| ||| |||||||| |||
Sbjct 110160 ACCAGGATGAAGCTTGGGTGAAACTAAGTGGAGGTCCGAACCGACTGATGTTGAAGAATC 110219
Query 122 AGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCT 181
|| ||||||| ||||| ||||||||||| || | | ||| || ||||||||||||
Sbjct 110220 AGCGGATGAGTTGTGGTTAGGGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTCC 110279
Query 182 CCGAAAACTATTTAGGTAGTGCCTCAAGTATCAC----CATC-GGGGGTAGAGCACTGTT 236
|||||| || ||| || ||| | || |||| |||||| |||||||||
Sbjct 110280 CCGAAATGCGTTGAGGCGCAGC----AGT-TGACTGGACATCTAGGGGTAAAGCACTGTT 110334
Query 237 ATGGCTAGGG-GGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGC--------G 287
|| ||| | | ||| ||||||| | |||||||| |||| |
Sbjct 110335 TCGGTGCGGGCCGCGAGAGCG--GTACCAAATCGAGGCAAACTCTGAATACTAGATATGA 110392
Query 288 CATC--AGTTTTACCG--------CGG-GAGTGAGGGCATGGGTGCTAAGGTCCGTGCCC 336
| || | | || | ||| |||||| ||||| | |||| | | | |
Sbjct 110393 CCTCCAAATAATAGGGGTCAAGGTCGGCCAGTGAGACGATGGGGGATAAGCTTCATCGTC 110452
Query 337 GAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAA 396
|||||| || | ||||| | ||||||||||||| ||||||| ||| ||| | | ||
Sbjct 110453 GAGAGGGAAACAGCCCGGATCACCAGCTAAGGCCCCTAAATGACCGCTCAGTGATA--AA 110510
Query 397 CGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGA 456
|| || | ||| ||||||| |||| ||| || | |||||||||| | || |||||
Sbjct 110511 GGAGGTAGGGGTGCAGAGACAGCCAGGAGGTTTGCCTAGAAGCAGCCA-CCCTTGAAAGA 110569
Query 457 GTGCGTAACAGCTCACTAGTCGAGGAGTCGGGCGTGGATAATAATCGGGTATTAAGTTGT 516
|||||||| |||||||| ||||| || ||| || || | |||| |||| |
Sbjct 110570 GTGCGTAATAGCTCACTGATCGAGCGCTCTTGCGCCGAAGATGAACGGG-GCTAAGCGAT 110628
Query 517 CTACCGAAGCAGTGGGAT-CATTTATATGATCGGTAGGGGAGC 558
|| ||||||| ||||||| | ||| ||||||||||||||
Sbjct 110629 CTGCCGAAGCTGTGGGATGTAAAAATA-CATCGGTAGGGGAGC 110670
Score = 179 bits (198), Expect = 1e-42
Identities = 397/583 (68%), Gaps = 38/583 (7%)
Strand=Plus/Minus
Query 2 CGAGTCCGAACAGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATG 61
|||||| | ||||| | ||| ||| | | |||||||| | |||||||| |||||
Sbjct 138910 CGAGTCTTCATAGGGCAATTGTCACTGCTTATGGACCCGAACCTGGGTGATCTATCCATG 138851
Query 62 GCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATT 121
||||||||||| | ||| | || |||||||||||||| ||| |||||||| |||
Sbjct 138850 ACCAGGATGAAGCTTGGGTGAAACTAAGTGGAGGTCCGAACCGACTGATGTTGAAGAATC 138791
Query 122 AGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCT 181
|| ||||||| ||||| ||||||||||| || | | ||| || ||||||||||||
Sbjct 138790 AGCGGATGAGTTGTGGTTAGGGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTCC 138731
Query 182 CCGAAAACTATTTAGGTAGTGCCTCAAGTATCAC----CATC-GGGGGTAGAGCACTGTT 236
|||||| || ||| || ||| | || |||| |||||| |||||||||
Sbjct 138730 CCGAAATGCGTTGAGGCGCAGC----AGT-TGACTGGACATCTAGGGGTAAAGCACTGTT 138676
Query 237 ATGGCTAGGG-GGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGC--------G 287
|| ||| | | ||| ||||||| | |||||||| |||| |
Sbjct 138675 TCGGTGCGGGCCGCGAGAGCG--GTACCAAATCGAGGCAAACTCTGAATACTAGATATGA 138618
Query 288 CATC--AGTTTTACCG--------CGG-GAGTGAGGGCATGGGTGCTAAGGTCCGTGCCC 336
| || | | || | ||| |||||| ||||| | |||| | | | |
Sbjct 138617 CCTCCAAATAATAGGGGTCAAGGTCGGCCAGTGAGACGATGGGGGATAAGCTTCATCGTC 138558
Query 337 GAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAA 396
|||||| || | ||||| | ||||||||||||| ||||||| ||| ||| | | ||
Sbjct 138557 GAGAGGGAAACAGCCCGGATCACCAGCTAAGGCCCCTAAATGACCGCTCAGTGATA--AA 138500
Query 397 CGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGA 456
|| || | ||| ||||||| |||| ||| || | |||||||||| | || |||||
Sbjct 138499 GGAGGTAGGGGTGCAGAGACAGCCAGGAGGTTTGCCTAGAAGCAGCCA-CCCTTGAAAGA 138441
Query 457 GTGCGTAACAGCTCACTAGTCGAGGAGTCGGGCGTGGATAATAATCGGGTATTAAGTTGT 516
|||||||| |||||||| ||||| || ||| || || | |||| |||| |
Sbjct 138440 GTGCGTAATAGCTCACTGATCGAGCGCTCTTGCGCCGAAGATGAACGGG-GCTAAGCGAT 138382
Query 517 CTACCGAAGCAGTGGGAT-CATTTATATGATCGGTAGGGGAGC 558
|| ||||||| ||||||| | ||| ||||||||||||||
Sbjct 138381 CTGCCGAAGCTGTGGGATGTAAAAATA-CATCGGTAGGGGAGC 138340
>seq9
Length=39018107
Score = 154 bits (170), Expect = 5e-35
Identities = 389/581 (67%), Gaps = 34/581 (6%)
Strand=Plus/Plus
Query 2 CGAGTCCGAACAGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATG 61
|||||| | ||||| | ||| ||| | | |||||||| | |||||||| |||||
Sbjct 28484465 CGAGTCTTCATAGGGCAATTGTCACTGCTTATGGACCCGAACCTGGGTGATCTATCCATG 28484524
Query 62 GCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATT 121
||||||||||| | ||| | || |||||||||||||| ||| |||||||| |||
Sbjct 28484525 ACCAGGATGAAGCTTGGGTGAAACTAAGTGGAGGTCCGAACCAACTGATGTTGAAGAATC 28484584
Query 122 AGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCT 181
| ||||||| ||||| ||||||||||| || | | ||| || ||||||||||||
Sbjct 28484585 AACGGATGAGTTGTGGTTAGGGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTCC 28484644
Query 182 CCGAAAACTATTTAGGTAGTGCCTCAAGTA--TCACCATC-GGGGGTAGAGCACTGTTAT 238
|| ||| || || | || || || | |||| |||||| |||||||||
Sbjct 28484645 CCAAAATGCGTTGAG---GCGCAGCAGTTAACTGGACATCTAGGGGTAAAGCACTGTTTC 28484701
Query 239 GGCTAGGG-GGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGC---GCATCAGT 294
|| ||| | | ||| ||||||| | |||||||| |||| | || | |
Sbjct 28484702 GGTGCGGGCCGCGAGAGCG--GTACCAAATCGAGGCAAACTCTGAATACTAGATATGACT 28484759
Query 295 T-----TTACCGCGG-----------GAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGA 338
| | | | || |||||| || || | |||| | | | |||
Sbjct 28484760 TCCAAATAATAGGGGTCAAGGTCGACCAGTGAGACGATAGGGGATAAGCTTCATCGTCGA 28484819
Query 339 GAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACG 398
|||| || | ||||| | ||||||||||||| ||| ||| || ||| | | || |
Sbjct 28484820 GAGGGAAACAGCCCGGATCACCAGCTAAGGCCCCTAAAAGACCACTCAGTGATA--AAAG 28484877
Query 399 AAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGT 458
| || | ||| ||||||| |||| ||| || | |||||||||| | || |||||||
Sbjct 28484878 AGGTAGGGGTGCAGAGACAGCCAGGAGGTTTGCCTAGAAGCAGCCA-CCCTTGAAAGAGT 28484936
Query 459 GCGTAACAGCTCACTAGTCGAGGAGTCGGGCGTGGATAATAATCGGGTATTAAGTTGTCT 518
|||||| ||||||||| ||||| || ||| || || | || | |||| |||
Sbjct 28484937 GCGTAATAGCTCACTAATCGAGCGCTCTTGCGCCGAAGATGAACGAG-GCTAAGCGATCT 28484995
Query 519 ACCGAAGCAGTGGGAT-CATTTATATGATCGGTAGGGGAGC 558
||||||| ||||||| | ||| ||||||| ||||||
Sbjct 28484996 GCCGAAGCTGTGGGATGTAAAAATA-CATCGGTAAGGGAGC 28485035
Score = 77.0 bits (84), Expect = 1e-11
Identities = 109/149 (73%), Gaps = 7/149 (5%)
Strand=Plus/Plus
Query 35 GACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAG-GTGCGGTAA--CACGCCCTG 91
|||| ||| | | ||||| || ||||| ||||||||||| |||| || || || |
Sbjct 8343799 GACCTGAATCTAGGTGATTTATCCATGACCAGGATGAAGCTTGCGTGAAACCAAGC---G 8343855
Query 92 GAGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGG 151
||||||||||| ||| |||||||| ||| | || || ||| | |||||||| || |
Sbjct 8343856 AAGGTCCGAACCAACTGATGTTGAAGAATCAACAAATAAGTTGTAGTTAGGGGTG-AATG 8343914
Query 152 CTAAACAAACTTGGAAATAGCTGGTTCTC 180
| | ||||||| || ||||| |||||
Sbjct 8343915 CCACTCAAACTTAGAGCTAGCTACTTCTC 8343943
>seq5
Length=74729908
Score = 109 bits (120), Expect = 2e-21
Identities = 95/118 (81%), Gaps = 0/118 (0%)
Strand=Plus/Plus
Query 35 GACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAG 94
|||||||| |||||||| ||||| ||||||||||| | ||| | || |||||
Sbjct 58273483 GACCCGAACTTGGGTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACTAAGTGGAG 58273542
Query 95 GTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGC 152
||||||||| ||| |||||||| |||||| ||||||| ||||| ||||||||||| ||
Sbjct 58273543 GTCCGAACCGACTGATGTTGAAGAATTAGCGGATGAGTTGTGGTTAGGGGTGAAATGC 58273600
Score = 96.9 bits (106), Expect = 1e-17
Identities = 127/174 (73%), Gaps = 3/174 (2%)
Strand=Plus/Minus
Query 306 AGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTA 365
|||||| ||||| | |||| | | | ||||||| || | ||| | | ||||||
Sbjct 2753523 AGTGAGACGATGGGAGATAAGCTTCATCGTCGAGAGGGAAACAGCCCGAATCACCAGCTA 2753464
Query 366 AGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGACAGCTAGGAT 425
||||||| ||||||| ||| ||| | | || || || | ||| ||||||| ||||
Sbjct 2753463 AGGCCCCTAAATGACCGCTCAGTGATA--AAGGAGGTAGGGGTGCAGAGACAGCCAGGAG 2753406
Query 426 GTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTCGA 479
||| || | |||||||||| | || ||||||||||||| |||||||| ||||
Sbjct 2753405 GTTTGCCTAGAAGCAGCCA-CCCTTGAAAGAGTGCGTAATAGCTCACTGATCGA 2753353
>seq10
Length=39358841
Score = 107 bits (118), Expect = 6e-21
Identities = 109/141 (77%), Gaps = 1/141 (1%)
Strand=Plus/Plus
Query 48 GTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACT 107
|||||||| ||||| ||||||||||| | ||| | || || |||||| |||| | |
Sbjct 15815354 GTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACTAAGTGTAGGTCCAAACCGATT 15815413
Query 108 AATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAA 167
|||||||| |||||| ||||||| ||||| || |||||||| || | ||||| | ||
Sbjct 15815414 GATGTTGAAGAATTAGCGGATGAGTTGTGGTTACGGGTGAAATGCCACTCAAACCTAGAG 15815473
Query 168 ATAGCTGGTTCTCTCCGAAAA 188
|||||| ||||| || ||||
Sbjct 15815474 CTAGCTGATTCTC-CCTAAAA 15815493
Score = 89.7 bits (98), Expect = 2e-15
Identities = 95/123 (77%), Gaps = 3/123 (2%)
Strand=Plus/Plus
Query 351 CCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGC 410
||||| | ||||||||||||| ||||||| ||| ||| | | || || || | |||
Sbjct 34324873 CCGGATCACCAGCTAAGGCCCCTAAATGACCGCTCAGTGATA--AAGGAGGTAGGGGTGC 34324930
Query 411 TAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTC 470
||||||| |||| ||| || | |||||||||| | || ||||||||||||| |||||
Sbjct 34324931 AGAGACAGCCAGGAGGTTTGCCTAGAAGCAGCCA-CCCTTGAAAGAGTGCGTAATAGCTC 34324989
Query 471 ACT 473
|||
Sbjct 34324990 ACT 34324992
>seq7
Length=52445601
Score = 89.7 bits (98), Expect = 2e-15
Identities = 85/109 (78%), Gaps = 0/109 (0%)
Strand=Plus/Minus
Query 90 TGGAGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAA 149
||||||||||||| ||||||||||||||| || ||||||| ||||| || ||||||||
Sbjct 18025199 TGGAGGTCCGAACTGGCTAATGTTGAAAAATCAGCGGATGAGTTGTGGTTAAGGGTGAAA 18025140
Query 150 GGCTAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGT 198
|| | ||||| || || || |||||| |||||| | || ||||
Sbjct 18025139 TGCCACTCAAACCCAGAGTTAACTAGTTCTCCCCGAAATGTGTTGAGGT 18025091
>seq3
Length=80079441
Score = 89.7 bits (98), Expect = 2e-15
Identities = 93/122 (76%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 66 GGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATTAGGG 125
|||||||| | ||| | || |||||||||||||| ||| |||||||| ||| || |
Sbjct 56887864 GGATGAAGCTTTGGTGAAACTAAGTGGAGGTCCGAACCGACTGATGTTGAAGAATCAGCG 56887923
Query 126 GATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCTCCGA 185
||||| ||||| ||||||||||| || | | ||| || |||||||||||| | ||
Sbjct 56887924 AATGAGTTGTGGTTAGGGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTCCCTGA 56887983
Query 186 AA 187
||
Sbjct 56887984 AA 56887985
Score = 78.8 bits (86), Expect = 3e-12
Identities = 114/159 (72%), Gaps = 3/159 (2%)
Strand=Plus/Minus
Query 315 ATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGA 374
||||| | |||| | | | |||| || || | ||||| | || ||||||||| |
Sbjct 56890215 ATGGGGGATAAGCTTCATCATCGAGGGGGAAACAGCCCGGATCACCAACTAAGGCCCAAA 56890156
Query 375 AATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTG 434
|||||| ||| ||| | | || || || | ||| ||||| | |||| ||| || |
Sbjct 56890155 AATGACCGCTCAGTGATA--AATGAGGTTGGGGTGCAGAGACAACCAGGAGGTTTGCCTA 56890098
Query 435 GAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACT 473
|||||||||| | || ||||||||||||| ||||||||
Sbjct 56890097 GAAGCAGCCACCC-TTGAAAGAGTGCGTAATAGCTCACT 56890060
>seq4
Length=41978195
Score = 82.4 bits (90), Expect = 3e-13
Identities = 102/140 (73%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 48 GTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACT 107
|||||||| ||||| | ||||| ||| | ||| | || |||| ||| ||||| ||
Sbjct 34289917 GTGATCTATCCATGACTAGGATAAAGCTTGGGTGAAACTAAGTGGAAGTCTGAACCGCCT 34289976
Query 108 AATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAA 167
|| || |||||||| |||||| |||| ||||||||||| |||| ||||| ||
Sbjct 34289977 GATATTAAAAAATTAATAGATGAGTTGTGATTAGGGGTGAAATGCTACTCAAACCCAGAG 34290036
Query 168 ATAGCTGGTTCTCTCCGAAA 187
|| ||||||||| | |||
Sbjct 34290037 CTAATTGGTTCTCTTCAAAA 34290056
>seq2
Length=64235786
Score = 77.0 bits (84), Expect = 1e-11
Identities = 120/168 (71%), Gaps = 8/168 (5%)
Strand=Plus/Plus
Query 315 ATGGGTGCTAAGGTC--CGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCC 372
||||| | |||| || ||| ||| ||| || || |||| | |||||||||||||
Sbjct 6694174 ATGGGGGATAAGTTCATCGT---CGAAAGGGAAACAACTCGGATCACCAGCTAAGGCCCC 6694230
Query 373 GAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCT 432
||||||| ||| | | | | || || || | || ||||||| | || ||| ||
Sbjct 6694231 TAAATGACCGCTCAATGATA--AAAGAGGTAGGGGTGTAGAGACAGCCAAGAGGTTTGCC 6694288
Query 433 TGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTCGAG 480
| |||||||||| | || ||||||||| ||| |||||||| |||||
Sbjct 6694289 TAGAAGCAGCCA-CCCTTGAAAGAGTGCATAATAGCTCACTGATCGAG 6694335
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1689516347904
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