Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eucalyptus_20grandis_20[refseq_20GCF_5F000612305.1_202014-05-02]
4,951 sequences; 691,429,809 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq2 107 3e-21
seq10 80.6 4e-13
seq9 73.4 6e-11
>seq2
Length=64235786
Score = 107 bits (118), Expect = 3e-21
Identities = 99/123 (80%), Gaps = 2/123 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| || ||| | | ||||||| | ||| || ||| || ||||
Sbjct 26403132 GTACGAGAGGAACCGTTGA-TTC-GCACAATTGGTCATCGCGCTTGGTTGAAAAGCCAGT 26403075
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| |||||||||||| | ||||||||||| |||||||||||||||||||||||| || |
Sbjct 26403074 GGCGCGAAGCTACCGTGCGCTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCTA 26403015
Query 121 GAA 123
|||
Sbjct 26403014 GAA 26403012
Score = 107 bits (118), Expect = 3e-21
Identities = 99/123 (80%), Gaps = 2/123 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| || ||| | | ||||||| | ||| || ||| || ||||
Sbjct 26411430 GTACGAGAGGAACCGTTGA-TTC-GCACAATTGGTCATCGCGCTTGGTTGAAAAGCCAGT 26411373
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| |||||||||||| | ||||||||||| |||||||||||||||||||||||| || |
Sbjct 26411372 GGCGCGAAGCTACCGTGCGCTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCTA 26411313
Query 121 GAA 123
|||
Sbjct 26411312 GAA 26411310
Score = 107 bits (118), Expect = 3e-21
Identities = 99/123 (80%), Gaps = 2/123 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| || ||| | | ||||||| | ||| || ||| || ||||
Sbjct 26466358 GTACGAGAGGAACCGTTGA-TTC-GCACAATTGGTCATCGCGCTTGGTTGAAAAGCCAGT 26466415
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| |||||||||||| | ||||||||||| |||||||||||||||||||||||| || |
Sbjct 26466416 GGCGCGAAGCTACCGTGCGCTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCTA 26466475
Query 121 GAA 123
|||
Sbjct 26466476 GAA 26466478
Score = 107 bits (118), Expect = 3e-21
Identities = 99/123 (80%), Gaps = 2/123 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| || ||| | | ||||||| | ||| || ||| || ||||
Sbjct 26492628 GTACGAGAGGAACCGTTGA-TTC-GCACAATTGGTCATCGCGCTTGGTTGAAAAGCCAGT 26492685
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| |||||||||||| | ||||||||||| |||||||||||||||||||||||| || |
Sbjct 26492686 GGCGCGAAGCTACCGTGCGCTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCTA 26492745
Query 121 GAA 123
|||
Sbjct 26492746 GAA 26492748
Score = 91.5 bits (100), Expect = 2e-16
Identities = 97/123 (79%), Gaps = 5/123 (4%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| || || | | ||||||| | ||| || ||| || ||||
Sbjct 26393419 GTACGAGAGGAACCGTTGA--TC-GCACAATTGGTCATCGCGCTTGG-TGAAAAGCCAGT 26393364
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| |||||||||||| | ||||||||||| ||||||| |||||||||||||||| || |
Sbjct 26393363 GGCGCGAAGCTACCGTGCGCTGGATTATGACTGAACG-CTCTAAGTCAGAATCCGGGCTA 26393305
Query 121 GAA 123
|||
Sbjct 26393304 GAA 26393302
Score = 89.7 bits (98), Expect = 8e-16
Identities = 95/123 (77%), Gaps = 2/123 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| || ||| | | ||||||| | ||| || ||| || ||
Sbjct 26531174 GTACGAGAGGAACCGTTGA-TTC-GCAGAATTGGTCATCGCGCTTGGTTGAAAAGCTGGT 26531117
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| |||||||||||| | |||||||| || |||||||||||||||| ||||||| || |
Sbjct 26531116 GGCGCGAAGCTACCGTGCGCTGGATTGTGACTGAACGCCTCTAAGTTAGAATCCGGGCTA 26531057
Query 121 GAA 123
|||
Sbjct 26531056 GAA 26531054
>seq10
Length=39358841
Score = 80.6 bits (88), Expect = 4e-13
Identities = 93/123 (76%), Gaps = 2/123 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||| || || ||| | | |||| || | || || ||| || ||||
Sbjct 13281631 GTACGAGAGGAATCGTTGA-TTC-GCACAATTAGTCATCGCACTTGGTTGAAAAGCCAGT 13281688
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| |||||||||||| | ||||||||||| | ||||||||||||||||||| | || |
Sbjct 13281689 GGCGCGAAGCTACCGTGCGCTGGATTATGATTAAACGCCTCTAAGTCAGAATTCGGGCTA 13281748
Query 121 GAA 123
|||
Sbjct 13281749 GAA 13281751
Score = 73.4 bits (80), Expect = 6e-11
Identities = 86/114 (75%), Gaps = 2/114 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||| |||| || || || ||| | | ||||||| | ||| || ||| || ||||
Sbjct 16381092 GTACAAGAGAAATCGTTGA-TTC-GCACAATTGGTCATCGCGCTTGGTTGAAAAGCCAGT 16381035
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| ||| |||||||| | |||||||||| ||||| |||||||||||| |||||
Sbjct 16381034 GGCGCAAAGCTACCGTGCACTGGATTATGACTGAATGCCTCTAAGTCAAAATCC 16380981
>seq9
Length=39018107
Score = 73.4 bits (80), Expect = 6e-11
Identities = 86/114 (75%), Gaps = 2/114 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||| |||| || || || ||| | | ||||||| | ||| || ||| || ||||
Sbjct 33907843 GTACAAGAGAAATCGTTGA-TTC-GCACAATTGGTCATCGCGCTTGGTTGAAAAGCCAGT 33907900
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| ||| |||||||| | |||||||||| ||||| |||||||||||| |||||
Sbjct 33907901 GGCGCAAAGCTACCGTGCACTGGATTATGACTGAATGCCTCTAAGTCAAAATCC 33907954
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819160708864
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |