Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucalyptus_20grandis_20[refseq_20GCF_5F000612305.1_202014-05-02] 4,951 sequences; 691,429,809 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq9 176 4e-39 >seq9 Length=39018107 Score = 176 bits (194), Expect = 4e-39 Identities = 572/875 (65%), Gaps = 20/875 (2%) Strand=Plus/Minus Query 61064 TGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCT 61123 ||||||| ||| |||| | | || ||| |||||||| ||||||| || ||||||| Sbjct 26348459 TGTTCCCTATCCAGTACCCGCAGATCTGGGAGATGTACAAGCAGGCGGAGGCCTCCTTCT 26348400 Query 61124 GGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAGCGTTT-ATCGAGC 61182 |||| | ||||||||||| | ||| | ||| | |||||||| | | | ||| | Sbjct 26348399 GGACCGCCGAGGAGGTCGACCTCTCCCAGGACCTCCGCCACTGGGAGGGCCTCACCGA-C 26348341 Query 61183 GGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTC 61242 || || | || ||| | | || ||| | || ||||| ||||| || ||||| |||||| Sbjct 26348340 GGCGAGCGCCACTTCGTCACCCACGTGCTCGCCTTCTTCGCCGCCTCCGACGGCATCGTC 26348281 Query 61243 AATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTC 61302 ||||| | | || ||| | ||||||| || | |||||||| || ||| Sbjct 26348280 CTCGAGAACCTCGCCGTCCGCTTCATGAAGGAGGTCCAGCTCTCGGAGGCCCGCGCCTTC 26348221 Query 61303 TACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGAT 61362 |||||||||||||| ||||| ||||| ||||||| ||||||||||| | || | || Sbjct 26348220 TACGGCTTCCAGATCGCCATCGAGAACATCCACTCCGAGATGTACAGCCTCCTACTGGAG 26348161 Query 61363 ACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCG 61422 || ||| ||| ||| || || || || | ||| ||| |||| || | ||| Sbjct 26348160 ACCTACGTCAAGGACTCCGCCGAGAAGGACCGCCTCTTCCGCGCCGTCGACACCGTCCCG 26348101 Query 61423 GCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCTA--CAT 61480 || || || || || || |||||| || |||||| || ||| | | | Sbjct 26348100 GCCGTCGCCCGCAAGGCCGACTGGGCCCTCCGCTGGATC-----GACGGCGGGGAGTCCT 26348046 Query 61481 TTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGG-ATCGTTT 61539 | | || || | || || || || || ||||| | || ||| || | | | | Sbjct 26348045 TCGCGGAGCGCCTCCTCGCCTTCGCCTGCGTTGAGGGGATCTTCTTCTCCGGCAGCTTCT 26347986 Query 61540 GCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAG 61599 | ||| ||||| ||| | ||||| || || || ||||| || || |||||| || ||| Sbjct 26347985 G-CGCCATCTTCTGGCTCAAGAAGCGGGGCCTCATGCCGGGGCTCACCTTCTCGAACGAG 26347927 Query 61600 TTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTAT 61659 | || || |||||||||||| | || || || || || | || | | |||| Sbjct 26347926 CTCATCTCTCGCGACGAGGGCCTCCACTGCGACTTCGCCTGCCTCCTCT--ACTCGCT-G 26347870 Query 61660 CTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATC 61719 ||| ||| ||| |||||||| ||| | ||| || || ||||| || ||| Sbjct 26347869 CTGCGGAACAAGCCGAGCGAGGAGCGGGTGAAGGGGATCGTGCGGGAGGCCGTCGACATC 26347810 Query 61720 GAACAGGAATT--TCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGAC 61777 || | ||| || |||| ||||| |||| | | || | || ||||| | | | Sbjct 26347809 GAGCGGGAGTTCGTCTG--CGACGCGCTGCCGTGCGCCCTGGTTGGGATGAACAGCGACC 26347752 Query 61778 TAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGC 61837 | ||| ||||| || || || || |||||||| || | | || | || || || Sbjct 26347751 TGATGGGCCAGTACATCGAGTTCGTCGCCGACCGGCTTCTCGGCGCGCTCGG-CTGCGGC 26347693 Query 61838 -GGATCTATAATACGAAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAG 61896 | | || | || ||||| || || | ||||| | || |||||| | || ||| Sbjct 26347692 AAGGTGTACGACGTGACGAACCCGTTCGACTGGATGGAGCTCATCTCGCTGCAGGGGAAG 26347633 Query 61897 ACGAATTTTTTCGAGAAACGTGTAGGCGACTATCA 61931 || || || |||||||| || || || || || || Sbjct 26347632 ACCAACTTCTTCGAGAAGCGGGTCGGGGAGTACCA 26347598 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397544010622640