Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucalyptus_20grandis_20[refseq_20GCF_5F000612305.1_202014-05-02] 4,951 sequences; 691,429,809 total letters Query= NC_031927.1 Length=216121 Score E Sequences producing significant alignments: (Bits) Value seq10 84.2 3e-11 >seq10 Length=39358841 Score = 84.2 bits (92), Expect = 3e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 162615 CGGTATTCTATTCAATCACGAAAGCTCACGCAGAGGAGAGACGTTCGTCACACGCAAGAT 162674 ||| || || ||||| ||||| | | || | || |||| ||||| || || ||||| Sbjct 30164439 CGGGATCCTGTTCAACCACGAGTCCCCGCGGCGGGGCGAGAACTTCGTGACCCGGAAGAT 30164380 Query 162675 CGTCCGAGCCTTGTCCCGAATTAGTGTGGGACTCCAAAGTGATCTACAACTTGGAAACCT 162734 | || ||| || || || | | || || || || | || || ||||| || Sbjct 30164379 CACTCGGGCCGTGGGGCGGATCAAGATCGGGCTGCAGAGCAAGCTGTTCCTGGGAAATCT 30164320 Query 162735 CAATGCCCGACGTGACTGGGGACACGCCAAAGACTACGTAGAGGCTATGTGGTTGATGCT 162794 | ||| || |||||||| |||| |||||||| |||||||||||| ||||| | Sbjct 30164319 GCAGGCCTCCCGGGACTGGGGGTTCGCCGGGGACTACGTGGAGGCTATGTGGATGATGTT 30164260 Query 162795 TCAGCAAGAGAAGCCAGATGATTATGTGATCGCAAC 162830 |||||||| ||||| ||||| || ||| | || || Sbjct 30164259 GCAGCAAGAAAAGCCGGATGACTACGTGGTGGCGAC 30164224 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 691416407318760