Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Euclidium_20syriacum_20[genbank_20GCA_5F900116095.1_202016-12-31]
160 sequences; 229,211,023 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq102 233 4e-59
seq89 233 4e-59
seq65 233 4e-59
seq64 233 4e-59
seq45 233 4e-59
seq29 233 4e-59
seq11 233 4e-59
>seq102
Length=10254
Score = 233 bits (258), Expect = 4e-59
Identities = 203/248 (82%), Gaps = 3/248 (1%)
Strand=Plus/Minus
Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130
|| |||||||||| ||||||||||| |||||||| |||| |||| | ||||||||||||
Sbjct 4115 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAT 4056
Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190
|| |||| | |||||| | || | ||||| |||||| | ||| || ||||||||
Sbjct 4055 GGGATAACATTATAGGATTT-CGATCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGAT 3997
Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250
||| ||||| ||||||||| | ||||| || ||||||||||||||||||||||||||
Sbjct 3996 TAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 3937
Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310
||||| ||| ||||||||||| || |||||||||||||||||||||| ||||||||
Sbjct 3936 GAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAA 3878
Query 311 GTTAGGGG 318
||| ||||
Sbjct 3877 GTTGGGGG 3870
>seq89
Length=8679
Score = 233 bits (258), Expect = 4e-59
Identities = 203/248 (82%), Gaps = 3/248 (1%)
Strand=Plus/Minus
Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130
|| |||||||||| ||||||||||| |||||||| |||| |||| | ||||||||||||
Sbjct 8534 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAT 8475
Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190
|| |||| | |||||| | || | ||||| |||||| | ||| || ||||||||
Sbjct 8474 GGGATAACATTATAGGATTT-CGATCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGAT 8416
Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250
||| ||||| ||||||||| | ||||| || ||||||||||||||||||||||||||
Sbjct 8415 TAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 8356
Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310
||||| ||| ||||||||||| || |||||||||||||||||||||| ||||||||
Sbjct 8355 GAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAA 8297
Query 311 GTTAGGGG 318
||| ||||
Sbjct 8296 GTTGGGGG 8289
>seq65
Length=7851
Score = 233 bits (258), Expect = 4e-59
Identities = 203/248 (82%), Gaps = 3/248 (1%)
Strand=Plus/Plus
Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130
|| |||||||||| ||||||||||| |||||||| |||| |||| | ||||||||||||
Sbjct 3880 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAT 3939
Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190
|| |||| | |||||| | || | ||||| |||||| | ||| || ||||||||
Sbjct 3940 GGGATAACATTATAGGATTT-CGATCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGAT 3998
Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250
||| ||||| ||||||||| | ||||| || ||||||||||||||||||||||||||
Sbjct 3999 TAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 4058
Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310
||||| ||| ||||||||||| || |||||||||||||||||||||| ||||||||
Sbjct 4059 GAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAA 4117
Query 311 GTTAGGGG 318
||| ||||
Sbjct 4118 GTTGGGGG 4125
>seq64
Length=9524166
Score = 233 bits (258), Expect = 4e-59
Identities = 203/248 (82%), Gaps = 3/248 (1%)
Strand=Plus/Plus
Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130
|| |||||||||| ||||||||||| |||||||| |||| |||| | ||||||||||||
Sbjct 4937698 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAT 4937757
Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190
|| |||| | |||||| | || | ||||| |||||| | ||| || ||||||||
Sbjct 4937758 GGGATAACATTATAGGATTT-CGATCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGAT 4937816
Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250
||| ||||| ||||||||| | ||||| || ||||||||||||||||||||||||||
Sbjct 4937817 TAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 4937876
Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310
||||| ||| ||||||||||| || |||||||||||||||||||||| ||||||||
Sbjct 4937877 GAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAA 4937935
Query 311 GTTAGGGG 318
||| ||||
Sbjct 4937936 GTTGGGGG 4937943
Score = 233 bits (258), Expect = 4e-59
Identities = 203/248 (82%), Gaps = 3/248 (1%)
Strand=Plus/Plus
Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130
|| |||||||||| ||||||||||| |||||||| |||| |||| | ||||||||||||
Sbjct 4946952 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAT 4947011
Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190
|| |||| | |||||| | || | ||||| |||||| | ||| || ||||||||
Sbjct 4947012 GGGATAACATTATAGGATTT-CGATCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGAT 4947070
Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250
||| ||||| ||||||||| | ||||| || ||||||||||||||||||||||||||
Sbjct 4947071 TAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 4947130
Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310
||||| ||| ||||||||||| || |||||||||||||||||||||| ||||||||
Sbjct 4947131 GAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAA 4947189
Query 311 GTTAGGGG 318
||| ||||
Sbjct 4947190 GTTGGGGG 4947197
Score = 233 bits (258), Expect = 4e-59
Identities = 203/248 (82%), Gaps = 3/248 (1%)
Strand=Plus/Plus
Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130
|| |||||||||| ||||||||||| |||||||| |||| |||| | ||||||||||||
Sbjct 4956206 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAT 4956265
Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190
|| |||| | |||||| | || | ||||| |||||| | ||| || ||||||||
Sbjct 4956266 GGGATAACATTATAGGATTT-CGATCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGAT 4956324
Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250
||| ||||| ||||||||| | ||||| || ||||||||||||||||||||||||||
Sbjct 4956325 TAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 4956384
Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310
||||| ||| ||||||||||| || |||||||||||||||||||||| ||||||||
Sbjct 4956385 GAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAA 4956443
Query 311 GTTAGGGG 318
||| ||||
Sbjct 4956444 GTTGGGGG 4956451
Score = 233 bits (258), Expect = 4e-59
Identities = 203/248 (82%), Gaps = 3/248 (1%)
Strand=Plus/Plus
Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130
|| |||||||||| ||||||||||| |||||||| |||| |||| | ||||||||||||
Sbjct 4965456 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAT 4965515
Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190
|| |||| | |||||| | || | ||||| |||||| | ||| || ||||||||
Sbjct 4965516 GGGATAACATTATAGGATTT-CGATCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGAT 4965574
Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250
||| ||||| ||||||||| | ||||| || ||||||||||||||||||||||||||
Sbjct 4965575 TAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 4965634
Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310
||||| ||| ||||||||||| || |||||||||||||||||||||| ||||||||
Sbjct 4965635 GAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAA 4965693
Query 311 GTTAGGGG 318
||| ||||
Sbjct 4965694 GTTGGGGG 4965701
Score = 233 bits (258), Expect = 4e-59
Identities = 203/248 (82%), Gaps = 3/248 (1%)
Strand=Plus/Plus
Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130
|| |||||||||| ||||||||||| |||||||| |||| |||| | ||||||||||||
Sbjct 4974645 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAT 4974704
Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190
|| |||| | |||||| | || | ||||| |||||| | ||| || ||||||||
Sbjct 4974705 GGGATAACATTATAGGATTT-CGATCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGAT 4974763
Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250
||| ||||| ||||||||| | ||||| || ||||||||||||||||||||||||||
Sbjct 4974764 TAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 4974823
Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310
||||| ||| ||||||||||| || |||||||||||||||||||||| ||||||||
Sbjct 4974824 GAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAA 4974882
Query 311 GTTAGGGG 318
||| ||||
Sbjct 4974883 GTTGGGGG 4974890
Score = 233 bits (258), Expect = 4e-59
Identities = 203/248 (82%), Gaps = 3/248 (1%)
Strand=Plus/Plus
Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130
|| |||||||||| ||||||||||| |||||||| |||| |||| | ||||||||||||
Sbjct 4983861 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAT 4983920
Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190
|| |||| | |||||| | || | ||||| |||||| | ||| || ||||||||
Sbjct 4983921 GGGATAACATTATAGGATTT-CGATCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGAT 4983979
Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250
||| ||||| ||||||||| | ||||| || ||||||||||||||||||||||||||
Sbjct 4983980 TAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 4984039
Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310
||||| ||| ||||||||||| || |||||||||||||||||||||| ||||||||
Sbjct 4984040 GAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAA 4984098
Query 311 GTTAGGGG 318
||| ||||
Sbjct 4984099 GTTGGGGG 4984106
Score = 233 bits (258), Expect = 4e-59
Identities = 203/248 (82%), Gaps = 3/248 (1%)
Strand=Plus/Plus
Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130
|| |||||||||| ||||||||||| |||||||| |||| |||| | ||||||||||||
Sbjct 4993098 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAT 4993157
Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190
|| |||| | |||||| | || | ||||| |||||| | ||| || ||||||||
Sbjct 4993158 GGGATAACATTATAGGATTT-CGATCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGAT 4993216
Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250
||| ||||| ||||||||| | ||||| || ||||||||||||||||||||||||||
Sbjct 4993217 TAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 4993276
Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310
||||| ||| ||||||||||| || |||||||||||||||||||||| ||||||||
Sbjct 4993277 GAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAA 4993335
Query 311 GTTAGGGG 318
||| ||||
Sbjct 4993336 GTTGGGGG 4993343
>seq45
Length=9254
Score = 233 bits (258), Expect = 4e-59
Identities = 203/248 (82%), Gaps = 3/248 (1%)
Strand=Plus/Minus
Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130
|| |||||||||| ||||||||||| |||||||| |||| |||| | ||||||||||||
Sbjct 342 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAT 283
Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190
|| |||| | |||||| | || | ||||| |||||| | ||| || ||||||||
Sbjct 282 GGGATAACATTATAGGATTT-CGATCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGAT 224
Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250
||| ||||| ||||||||| | ||||| || ||||||||||||||||||||||||||
Sbjct 223 TAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 164
Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310
||||| ||| ||||||||||| || |||||||||||||||||||||| ||||||||
Sbjct 163 GAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAA 105
Query 311 GTTAGGGG 318
||| ||||
Sbjct 104 GTTGGGGG 97
>seq29
Length=10259
Score = 233 bits (258), Expect = 4e-59
Identities = 203/248 (82%), Gaps = 3/248 (1%)
Strand=Plus/Plus
Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130
|| |||||||||| ||||||||||| |||||||| |||| |||| | ||||||||||||
Sbjct 1596 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAT 1655
Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190
|| |||| | |||||| | || | ||||| |||||| | ||| || ||||||||
Sbjct 1656 GGGATAACATTATAGGATTT-CGATCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGAT 1714
Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250
||| ||||| ||||||||| | ||||| || ||||||||||||||||||||||||||
Sbjct 1715 TAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 1774
Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310
||||| ||| ||||||||||| || |||||||||||||||||||||| ||||||||
Sbjct 1775 GAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAA 1833
Query 311 GTTAGGGG 318
||| ||||
Sbjct 1834 GTTGGGGG 1841
>seq11
Length=5680
Score = 233 bits (258), Expect = 4e-59
Identities = 203/248 (82%), Gaps = 3/248 (1%)
Strand=Plus/Minus
Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130
|| |||||||||| ||||||||||| |||||||| |||| |||| | ||||||||||||
Sbjct 1762 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAT 1703
Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190
|| |||| | |||||| | || | ||||| |||||| | ||| || ||||||||
Sbjct 1702 GGGATAACATTATAGGATTT-CGATCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGAT 1644
Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250
||| ||||| ||||||||| | ||||| || ||||||||||||||||||||||||||
Sbjct 1643 TAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 1584
Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310
||||| ||| ||||||||||| || |||||||||||||||||||||| ||||||||
Sbjct 1583 GAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAA 1525
Query 311 GTTAGGGG 318
||| ||||
Sbjct 1524 GTTGGGGG 1517
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915198535680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |