Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Euclidium_20syriacum_20[genbank_20GCA_5F900116095.1_202016-12-31]
160 sequences; 229,211,023 total letters
Query= AAMG01000811.1
Length=502
Score E
Sequences producing significant alignments: (Bits) Value
seq153 475 1e-131
seq80 136 1e-29
>seq153
Length=83015
Score = 475 bits (526), Expect = 1e-131
Identities = 406/497 (82%), Gaps = 3/497 (1%)
Strand=Plus/Minus
Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60
|||| |||||| |||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 33442 TACGTTCGCAAGAATGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 33383
Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120
|||||||||||||| |||| |||||||||||||||| |||||||| | || ||||
Sbjct 33382 GTGGTTTAATTCGATGCAAAGCGAAGAACCTTACCAGGGCTTGACATGCCGCGAATCCTC 33323
Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAG 180
| || | ||||| | || |||||| || | ||||||| ||||||| |||||||||
Sbjct 33322 TTGAAAGAGAGGGGTGCC-TTCGGGA-ACGTGGACACAGGTGGTGCATGGCTGTCGTCAG 33265
Query 181 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGC 240
|||||| ||| || ||||||||||||||||||||||||||||||||| | ||||||||
Sbjct 33264 CTCGTGCCGTAAGGTGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTCGTGTTTAGTTGC 33205
Query 241 CATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGAC 300
|| | || |||| || || || | |||||||||||| || ||||||||||||| |||
Sbjct 33204 CACCGTTGAGTTTGGAACCCTGAACAGACTGCCGGTGATAAGCCGGAGGAAGGTGAGGAT 33145
Query 301 GACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATAC 360
|||||||| ||||||||||||||||| ||||| |||||||||||||||||| | ||
Sbjct 33144 GACGTCAAGTCATCATGCCCCTTATGCCCTGGGCGACACACGTGCTACAATGGCCGGGAC 33085
Query 361 AAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTG 420
|||||| |||| |||||||| ||| || ||| ||| || ||||||||||||||
Sbjct 33084 AAAGGGTCGCGATCCCGCGAGGGTGAGCTAACTCCAAAAACCCGTCCTCAGTTCGGATTG 33025
Query 421 TAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAG-CATGCTA 479
|| |||||||||| || ||||||| ||||||||||||||||| | |||| ||| |
Sbjct 33024 CAGGCTGCAACTCGCCTGCATGAAGCCGGAATCGCTAGTAATCGCCGGTCAGCCATACGG 32965
Query 480 CGGTGAATACGTTCCCG 496
|||||||| ||||||||
Sbjct 32964 CGGTGAATTCGTTCCCG 32948
>seq80
Length=21647715
Score = 136 bits (150), Expect = 1e-29
Identities = 160/217 (74%), Gaps = 21/217 (10%)
Strand=Plus/Minus
Query 18 AACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGAAGC 77
||||||||||||||||||||| || ||| |||||||||| ||||||||||||||| | |
Sbjct 16471723 AACTCAAAGGAATTGACGGGGGCCTGCAAAAGCGGTGGAACATGTGGTTTAATTCAATAC 16471664
Query 78 AACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTCTAGAGATAGAGGTTTCC 137
||| || | |||||||||| ||||||| | ||| | | | | |||
Sbjct 16471663 AACACGCAAAACCTTACCATCCCTTGACA---TATGA-----------AAAAACCTATCC 16471618
Query 138 CCTTCGG---GGGACAGAGT----GACAGGTGATGCATGGTTGTCGTCAGCTCGTGTCGT 190
||| || || | | ||||||| ||||||| |||||||||||||||||||
Sbjct 16471617 TTAACGGGATGGTACTCACTTTCATACAGGTGCTGCATGGCTGTCGTCAGCTCGTGTCGT 16471558
Query 191 GAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCT 227
|||||||| ||| |||||| |||||||| ||||||
Sbjct 16471557 GAGATGTTTGGTCAAGTCCTATAACGAGCGAAACCCT 16471521
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1503997593600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |