Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Euclidium_20syriacum_20[genbank_20GCA_5F900116095.1_202016-12-31]
160 sequences; 229,211,023 total letters
Query= AAMG01001178.1
Length=367
Score E
Sequences producing significant alignments: (Bits) Value
seq153 230 5e-58
seq139 77.0 7e-12
>seq153
Length=83015
Score = 230 bits (254), Expect = 5e-58
Identities = 253/329 (77%), Gaps = 21/329 (6%)
Strand=Plus/Plus
Query 10 CCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAA 69
||| || |||||| | | |||||||||||| || |||||||||||||||||| ||
Sbjct 33887 CCGTAGGCCTTCTACCTC-CACGCGGCATTG-CTCCGTCAGGCTTTCGCCCATTGCGGAA 33944
Query 70 TATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGA 129
|||||||||||||||||||||||||||||||| |||||||||||| |||||||| ||||
Sbjct 33945 AATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGA 34004
Query 130 TCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGC 189
|||||||||| |||||| ||| |||| |||||||||| ||| ||| ||||||||||||||
Sbjct 34005 TCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGC 34064
Query 190 TAATCCGAC-CTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTTCTCCCGT 248
||||| ||| | || | | || || ||| || ||| |||| | | |
Sbjct 34065 TAATCAGACGCGAGCCCCTCCT-----CG---GGC-----GGATTCCTCCTTTTGCTCCT 34111
Query 249 AGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCA--GGCAGAT 306
| | || | ||||||||| |||||||| ||| | ||| || ||| ||||| |
Sbjct 34112 CAG-CCTACGGGGTATTAGCAGCCGTTTCCAGCTGTTGTTCCC--CTCCCAAGGGCAGGT 34168
Query 307 TCCTAGGCATTACTCACCCGTCCGCCGCT 335
|| || || ||||||||||||||||| ||
Sbjct 34169 TCTTACGCGTTACTCACCCGTCCGCCACT 34197
>seq139
Length=20634497
Score = 77.0 bits (84), Expect = 7e-12
Identities = 50/55 (91%), Gaps = 0/55 (0%)
Strand=Plus/Plus
Query 52 CTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCG 106
|| ||||||||||| || |||||||||||||||||||||||||||||||| |||
Sbjct 18809579 CTCTCGCCCATTGTGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCG 18809633
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1071998284800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |