Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Euclidium_20syriacum_20[genbank_20GCA_5F900116095.1_202016-12-31]
160 sequences; 229,211,023 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq102 80.6 3e-13
seq89 80.6 3e-13
seq65 80.6 3e-13
seq64 80.6 3e-13
seq45 80.6 3e-13
seq29 80.6 3e-13
seq11 80.6 3e-13
>seq102
Length=10254
Score = 80.6 bits (88), Expect = 3e-13
Identities = 78/98 (80%), Gaps = 2/98 (2%)
Strand=Plus/Plus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71
|||||| |||||| || | |||||| | |||| |||||||||||||| | | |||||
Sbjct 4019 CCAACACAATAGGATCGAAA-TCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTA 4077
Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109
|| |||||||| ||||||||||| |||| |||| ||
Sbjct 4078 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 4115
>seq89
Length=8679
Score = 80.6 bits (88), Expect = 3e-13
Identities = 78/98 (80%), Gaps = 2/98 (2%)
Strand=Plus/Plus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71
|||||| |||||| || | |||||| | |||| |||||||||||||| | | |||||
Sbjct 8438 CCAACACAATAGGATCGAAA-TCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTA 8496
Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109
|| |||||||| ||||||||||| |||| |||| ||
Sbjct 8497 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 8534
>seq65
Length=7851
Score = 80.6 bits (88), Expect = 3e-13
Identities = 78/98 (80%), Gaps = 2/98 (2%)
Strand=Plus/Minus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71
|||||| |||||| || | |||||| | |||| |||||||||||||| | | |||||
Sbjct 3976 CCAACACAATAGGATCGAAA-TCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTA 3918
Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109
|| |||||||| ||||||||||| |||| |||| ||
Sbjct 3917 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 3880
>seq64
Length=9524166
Score = 80.6 bits (88), Expect = 3e-13
Identities = 78/98 (80%), Gaps = 2/98 (2%)
Strand=Plus/Minus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71
|||||| |||||| || | |||||| | |||| |||||||||||||| | | |||||
Sbjct 4937794 CCAACACAATAGGATCGAAA-TCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTA 4937736
Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109
|| |||||||| ||||||||||| |||| |||| ||
Sbjct 4937735 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 4937698
Score = 80.6 bits (88), Expect = 3e-13
Identities = 78/98 (80%), Gaps = 2/98 (2%)
Strand=Plus/Minus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71
|||||| |||||| || | |||||| | |||| |||||||||||||| | | |||||
Sbjct 4947048 CCAACACAATAGGATCGAAA-TCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTA 4946990
Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109
|| |||||||| ||||||||||| |||| |||| ||
Sbjct 4946989 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 4946952
Score = 80.6 bits (88), Expect = 3e-13
Identities = 78/98 (80%), Gaps = 2/98 (2%)
Strand=Plus/Minus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71
|||||| |||||| || | |||||| | |||| |||||||||||||| | | |||||
Sbjct 4956302 CCAACACAATAGGATCGAAA-TCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTA 4956244
Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109
|| |||||||| ||||||||||| |||| |||| ||
Sbjct 4956243 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 4956206
Score = 80.6 bits (88), Expect = 3e-13
Identities = 78/98 (80%), Gaps = 2/98 (2%)
Strand=Plus/Minus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71
|||||| |||||| || | |||||| | |||| |||||||||||||| | | |||||
Sbjct 4965552 CCAACACAATAGGATCGAAA-TCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTA 4965494
Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109
|| |||||||| ||||||||||| |||| |||| ||
Sbjct 4965493 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 4965456
Score = 80.6 bits (88), Expect = 3e-13
Identities = 78/98 (80%), Gaps = 2/98 (2%)
Strand=Plus/Minus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71
|||||| |||||| || | |||||| | |||| |||||||||||||| | | |||||
Sbjct 4974741 CCAACACAATAGGATCGAAA-TCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTA 4974683
Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109
|| |||||||| ||||||||||| |||| |||| ||
Sbjct 4974682 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 4974645
Score = 80.6 bits (88), Expect = 3e-13
Identities = 78/98 (80%), Gaps = 2/98 (2%)
Strand=Plus/Minus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71
|||||| |||||| || | |||||| | |||| |||||||||||||| | | |||||
Sbjct 4983957 CCAACACAATAGGATCGAAA-TCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTA 4983899
Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109
|| |||||||| ||||||||||| |||| |||| ||
Sbjct 4983898 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 4983861
Score = 80.6 bits (88), Expect = 3e-13
Identities = 78/98 (80%), Gaps = 2/98 (2%)
Strand=Plus/Minus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71
|||||| |||||| || | |||||| | |||| |||||||||||||| | | |||||
Sbjct 4993194 CCAACACAATAGGATCGAAA-TCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTA 4993136
Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109
|| |||||||| ||||||||||| |||| |||| ||
Sbjct 4993135 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 4993098
>seq45
Length=9254
Score = 80.6 bits (88), Expect = 3e-13
Identities = 78/98 (80%), Gaps = 2/98 (2%)
Strand=Plus/Plus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71
|||||| |||||| || | |||||| | |||| |||||||||||||| | | |||||
Sbjct 246 CCAACACAATAGGATCGAAA-TCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTA 304
Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109
|| |||||||| ||||||||||| |||| |||| ||
Sbjct 305 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 342
>seq29
Length=10259
Score = 80.6 bits (88), Expect = 3e-13
Identities = 78/98 (80%), Gaps = 2/98 (2%)
Strand=Plus/Minus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71
|||||| |||||| || | |||||| | |||| |||||||||||||| | | |||||
Sbjct 1692 CCAACACAATAGGATCGAAA-TCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTA 1634
Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109
|| |||||||| ||||||||||| |||| |||| ||
Sbjct 1633 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 1596
>seq11
Length=5680
Score = 80.6 bits (88), Expect = 3e-13
Identities = 78/98 (80%), Gaps = 2/98 (2%)
Strand=Plus/Plus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71
|||||| |||||| || | |||||| | |||| |||||||||||||| | | |||||
Sbjct 1666 CCAACACAATAGGATCGAAA-TCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTA 1724
Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109
|| |||||||| ||||||||||| |||| |||| ||
Sbjct 1725 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 1762
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595199077440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |