Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euclidium_20syriacum_20[genbank_20GCA_5F900116095.1_202016-12-31] 160 sequences; 229,211,023 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq102 80.6 3e-13 seq89 80.6 3e-13 seq65 80.6 3e-13 seq64 80.6 3e-13 seq45 80.6 3e-13 seq29 80.6 3e-13 seq11 80.6 3e-13 >seq102 Length=10254 Score = 80.6 bits (88), Expect = 3e-13 Identities = 78/98 (80%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 4019 CCAACACAATAGGATCGAAA-TCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTA 4077 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 4078 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 4115 >seq89 Length=8679 Score = 80.6 bits (88), Expect = 3e-13 Identities = 78/98 (80%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 8438 CCAACACAATAGGATCGAAA-TCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTA 8496 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 8497 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 8534 >seq65 Length=7851 Score = 80.6 bits (88), Expect = 3e-13 Identities = 78/98 (80%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 3976 CCAACACAATAGGATCGAAA-TCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTA 3918 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 3917 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 3880 >seq64 Length=9524166 Score = 80.6 bits (88), Expect = 3e-13 Identities = 78/98 (80%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 4937794 CCAACACAATAGGATCGAAA-TCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTA 4937736 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 4937735 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 4937698 Score = 80.6 bits (88), Expect = 3e-13 Identities = 78/98 (80%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 4947048 CCAACACAATAGGATCGAAA-TCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTA 4946990 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 4946989 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 4946952 Score = 80.6 bits (88), Expect = 3e-13 Identities = 78/98 (80%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 4956302 CCAACACAATAGGATCGAAA-TCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTA 4956244 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 4956243 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 4956206 Score = 80.6 bits (88), Expect = 3e-13 Identities = 78/98 (80%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 4965552 CCAACACAATAGGATCGAAA-TCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTA 4965494 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 4965493 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 4965456 Score = 80.6 bits (88), Expect = 3e-13 Identities = 78/98 (80%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 4974741 CCAACACAATAGGATCGAAA-TCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTA 4974683 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 4974682 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 4974645 Score = 80.6 bits (88), Expect = 3e-13 Identities = 78/98 (80%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 4983957 CCAACACAATAGGATCGAAA-TCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTA 4983899 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 4983898 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 4983861 Score = 80.6 bits (88), Expect = 3e-13 Identities = 78/98 (80%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 4993194 CCAACACAATAGGATCGAAA-TCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTA 4993136 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 4993135 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 4993098 >seq45 Length=9254 Score = 80.6 bits (88), Expect = 3e-13 Identities = 78/98 (80%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 246 CCAACACAATAGGATCGAAA-TCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTA 304 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 305 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 342 >seq29 Length=10259 Score = 80.6 bits (88), Expect = 3e-13 Identities = 78/98 (80%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 1692 CCAACACAATAGGATCGAAA-TCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTA 1634 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 1633 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 1596 >seq11 Length=5680 Score = 80.6 bits (88), Expect = 3e-13 Identities = 78/98 (80%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 1666 CCAACACAATAGGATCGAAA-TCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTA 1724 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 1725 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 1762 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595199077440