Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Euclidium_20syriacum_20[genbank_20GCA_5F900116095.1_202016-12-31]
160 sequences; 229,211,023 total letters
Query= AAMG01002175.1
Length=414
Score E
Sequences producing significant alignments: (Bits) Value
seq153 269 6e-70
seq139 78.8 2e-12
>seq153
Length=83015
Score = 269 bits (298), Expect = 6e-70
Identities = 303/404 (75%), Gaps = 30/404 (7%)
Strand=Plus/Plus
Query 11 ACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAA 70
||||| ||||||||| | | |||||||||| ||| | |||||||| ||||||||| | ||
Sbjct 33885 ACCCGTAGGCCTTCTACCTCCACGCGGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAA 33944
Query 71 TATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGG 130
|||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||
Sbjct 33945 AATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGA 34004
Query 131 TCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCAACTAGC 190
|||||||||| ||||||||| |||| |||||| ||| || ||| || | |||||||||
Sbjct 34005 TCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGC 34064
Query 191 TAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGC 250
||||| | | | | ||| || | || ||| ||| |||| || |
Sbjct 34065 TAATCAGACGCGAGCCCCTCC--------TCGGGCGGA--TTCCTCCT-TTTGCTCCTCA 34113
Query 251 GACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCAGTTTCC 310
| | || | ||||||||| |||||||||| ||| | ||||||| ||||| |||
Sbjct 34114 GCC--TACGGGGTATTAGCAGCCGTTTCCAGCTGTTGTTCCCCTCCCAAGGGCAGGTTCT 34171
Query 311 CAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTGTTACCG 370
| | |||||||||||||||||||| ||| || || |||| |||
Sbjct 34172 TACGCGTTACTCACCCGTCCGCCACT------GGAAACACCA-----CTTC------CCG 34214
Query 371 TTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414
| |||||||||||||||| || ||||||||||||||| |||||
Sbjct 34215 TCCGACTTGCATGTGTTAAGCATGCCGCCAGCGTTCATCCTGAG 34258
>seq139
Length=20634497
Score = 78.8 bits (86), Expect = 2e-12
Identities = 48/51 (94%), Gaps = 0/51 (0%)
Strand=Plus/Plus
Query 57 CGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCG 107
||||||||||| || |||||||||||||||||||||||||||||||| |||
Sbjct 18809583 CGCCCATTGTGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCG 18809633
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1222398044160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |