Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euclidium_20syriacum_20[genbank_20GCA_5F900116095.1_202016-12-31] 160 sequences; 229,211,023 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq64 192 5e-44 >seq64 Length=9524166 Score = 192 bits (212), Expect = 5e-44 Identities = 376/547 (69%), Gaps = 13/547 (2%) Strand=Plus/Plus Query 61096 ATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGAC 61155 |||||||| ||||| || || ||||| ||||||| ||||| ||||||||||| ||||| Sbjct 403701 ATGTACAAGAAGGCCGAGGCATCCTTTTGGACGGCCGAGGAAGTCGATTTGTCACAAGAC 403760 Query 61156 ATGAATGACTGGGAGCGTTT-ATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGC 61214 || |||||| | | | ||| ||| || | ||| ||||| ||||| ||| | || Sbjct 403761 GGTCGCGATTGGGAGAATCTCAACGA-CGGCGAGCGACACTTCATCAAACACGTGCTCGC 403819 Query 61215 GTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGA 61274 ||||| ||||| || ||||| ||||| |||||| | || ||| | || Sbjct 403820 TTTCTTCGCCGCATCCGACGGAATCGTTCTCGAGAATCTGGCTTCCCGATTCATGTCCGA 403879 Query 61275 GGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCA 61334 || ||||| |||||||||||| ||||||||| |||||||| || || ||||| |||| Sbjct 403880 TGTTCAAGTCTCGGAGGCGCGTGCTTTCTACGGTTTCCAGATCGCGATCGAGAACATCCA 403939 Query 61335 CTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACG 61394 ||| ||||||||||| | ||| |||| || ||||||| ||| ||| | || | Sbjct 403940 CTCCGAGATGTACAGCCTCCTCCTCGACACATACATCAAGGACAACAAGGAGAGAGACCA 403999 Query 61395 ATTGTTCAATGCCATCGAGACGATACC-GGCG--GTGAAGCGGAAAGCGGATTGGGCCTT 61451 | || ||||||||||| || || ||| | ||| |||||| | ||||| | Sbjct 404000 TCTCTTTCGCGCCATCGAGACCATCCCTTGCGTCGCGAA---GAAAGCCCAGTGGGCGAT 404056 Query 61452 CAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGT 61511 | |||||| | | | | || || | || || | |||| || || || Sbjct 404057 GACATGGATCGACGG---ATCTCAGACCTTCGCCGAGCGTATCGTGGCTTTCGCCTGCGT 404113 Query 61512 CGAGGGTGTATTTTTCAGTGGATCGTTT-GCCGCAATCTTTTGGTTGAAGAAACGTGGAC 61570 ||| ||| | || ||| || | |||| | | || || ||| | ||||| || || | Sbjct 404114 CGAAGGTATCTTCTTCTCCGG-TAGTTTCTGCTCGATTTTCTGGCTTAAGAAGCGCGGTC 404172 Query 61571 TTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTG 61630 | |||||||| | |||||| |||||||||||| || || ||||| ||| | || || | Sbjct 404173 TCATGCCCGGATTAACCTTCTCCAATGAGTTGATCTCGCGAGACGAAGGCTTACACTGCG 404232 Query 61631 ATTTTGC 61637 |||| || Sbjct 404233 ATTTCGC 404239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567224742400