Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eutrema_20salsugineum_20[refseq_20GCF_5F000478725.1_202013-11-05]
638 sequences; 243,110,105 total letters
Query= AAMG01000383.1
Length=435
Score E
Sequences producing significant alignments: (Bits) Value
seq33 123 6e-26
>seq33
Length=9343251
Score = 123 bits (136), Expect = 6e-26
Identities = 161/222 (73%), Gaps = 2/222 (1%)
Strand=Plus/Minus
Query 190 GGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGC 249
|||||| | ||| ||| |||||||||||||| || | | ||||||||| |||||| ||
Sbjct 3636940 GGAATTTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGGCGAAAGC 3636881
Query 250 AGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGA 309
| | ||||| |||||||| || | |||||||| ||||||| || ||||||||
Sbjct 3636880 ACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATGGGATTAGA 3636821
Query 310 TACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTACTTCCTTG- 368
||||| ||||||| ||| |||||||| ||||| | || | | | || ||
Sbjct 3636820 TACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGCGCTGTGCGTATCGACCCGTGC 3636761
Query 369 -GTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409
|| ||||||||||| | |||| ||||||||||| |||
Sbjct 3636760 AGTGCTGTAGCTAACGCCTTAAGTATCCCGCCTGGGGAGTAC 3636719
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1289591772352
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |