Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutrema_20salsugineum_20[refseq_20GCF_5F000478725.1_202013-11-05] 638 sequences; 243,110,105 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq81 123 5e-26 seq9 78.8 2e-12 >seq81 Length=19988679 Score = 123 bits (136), Expect = 5e-26 Identities = 115/146 (79%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | || | ||||||||||| || | ||||| ||||||| |||||| Sbjct 15443609 GCATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACTGTGCCCAGATCGTT 15443550 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 ||||||| ||||||||||||||| | |||||||||| ||||||||||||||||||| Sbjct 15443549 ACGCCTTCATCACGGGTCGGAACTTACTCAACAAGGAATTACGCTACCTTAGGACCGTTA 15443490 Query 127 TAGTTACGGCCGCCGTTTACTGGGGC 152 || || | | ||||| || | ||| Sbjct 15443489 TATTTTCTTCTTCCGTTCACCGAGGC 15443464 >seq9 Length=11574597 Score = 78.8 bits (86), Expect = 2e-12 Identities = 52/58 (90%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 307 GCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAACAATAGTTCTC 364 |||||||||||||| |||||||||||||||||||||||||||||| || |||||| Sbjct 3224843 GCACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTCCTTCGACATGGTTCTC 3224900 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062393221888