Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eutrema_20salsugineum_20[refseq_20GCF_5F000478725.1_202013-11-05]
638 sequences; 243,110,105 total letters
Query= AAMG01000753.1
Length=364
Score E
Sequences producing significant alignments: (Bits) Value
seq81 123 5e-26
seq9 78.8 2e-12
>seq81
Length=19988679
Score = 123 bits (136), Expect = 5e-26
Identities = 115/146 (79%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66
|||||||||| | || | ||||||||||| || | ||||| ||||||| ||||||
Sbjct 15443609 GCATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACTGTGCCCAGATCGTT 15443550
Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126
||||||| ||||||||||||||| | |||||||||| |||||||||||||||||||
Sbjct 15443549 ACGCCTTCATCACGGGTCGGAACTTACTCAACAAGGAATTACGCTACCTTAGGACCGTTA 15443490
Query 127 TAGTTACGGCCGCCGTTTACTGGGGC 152
|| || | | ||||| || | |||
Sbjct 15443489 TATTTTCTTCTTCCGTTCACCGAGGC 15443464
>seq9
Length=11574597
Score = 78.8 bits (86), Expect = 2e-12
Identities = 52/58 (90%), Gaps = 0/58 (0%)
Strand=Plus/Plus
Query 307 GCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAACAATAGTTCTC 364
|||||||||||||| |||||||||||||||||||||||||||||| || ||||||
Sbjct 3224843 GCACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTCCTTCGACATGGTTCTC 3224900
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1062393221888
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |