Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eutrema_20salsugineum_20[refseq_20GCF_5F000478725.1_202013-11-05]
638 sequences; 243,110,105 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq33 80.6 3e-13
>seq33
Length=9343251
Score = 80.6 bits (88), Expect = 3e-13
Identities = 78/98 (80%), Gaps = 2/98 (2%)
Strand=Plus/Minus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71
|||||| |||||| || | |||||| | |||| |||||||||||||| | | |||||
Sbjct 7317289 CCAACACAATAGGATCGAAA-TCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTA 7317231
Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109
|| |||||||| ||||||||||| |||| |||| ||
Sbjct 7317230 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 7317193
Score = 80.6 bits (88), Expect = 3e-13
Identities = 78/98 (80%), Gaps = 2/98 (2%)
Strand=Plus/Minus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71
|||||| |||||| || | |||||| | |||| |||||||||||||| | | |||||
Sbjct 7326858 CCAACACAATAGGATCGAAA-TCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTA 7326800
Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109
|| |||||||| ||||||||||| |||| |||| ||
Sbjct 7326799 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 7326762
Score = 80.6 bits (88), Expect = 3e-13
Identities = 78/98 (80%), Gaps = 2/98 (2%)
Strand=Plus/Minus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71
|||||| |||||| || | |||||| | |||| |||||||||||||| | | |||||
Sbjct 7336632 CCAACACAATAGGATCGAAA-TCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTA 7336574
Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109
|| |||||||| ||||||||||| |||| |||| ||
Sbjct 7336573 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 7336536
Score = 77.0 bits (84), Expect = 4e-12
Identities = 73/91 (80%), Gaps = 2/91 (2%)
Strand=Plus/Minus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71
|||||| |||||| || | |||||| | |||| |||||||||||||| | | |||||
Sbjct 7346405 CCAACACAATAGGATCGAAA-TCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTA 7346347
Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAG 102
|| |||||||| ||||||||||| |||||
Sbjct 7346346 GGCTTGCTTTGAGCACTCTAATTTCTTCAAG 7346316
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595196321292
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |