Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eutrema_20salsugineum_20[refseq_20GCF_5F000478725.1_202013-11-05]
638 sequences; 243,110,105 total letters
Query= AAMG01001962.1
Length=275
Score E
Sequences producing significant alignments: (Bits) Value
seq154 86.0 1e-14
>seq154
Length=17905225
Score = 86.0 bits (94), Expect = 1e-14
Identities = 53/57 (93%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 168 CCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACA 224
|||||||||||| |||||||||||||||||||| ||| || ||||||||||||||||
Sbjct 13532034 CCGAACTGTCTCACGACGTTCTGAACCCAGCTCACGTACCGCTTTAATGGGCGAACA 13532090
Score = 84.2 bits (92), Expect = 3e-14
Identities = 83/105 (79%), Gaps = 3/105 (3%)
Strand=Plus/Plus
Query 109 GGTCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGAC 168
||||||||||||||| ||| || |||||| | | |||||||| ||||| |||||
Sbjct 13927756 GGTCCTCTCGTACTAGGGAAAGT--CTCTCATGCT-CTAACGCCCACACCGGATGGGGAC 13927812
Query 169 CGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTA 213
||||||||||| ||||| | |||||| ||||| || || |||||
Sbjct 13927813 CGAACTGTCTCACGACGCTGTGAACCAAGCTCTTGTACCGCTTTA 13927857
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 780795174168
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |