Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutrema_20salsugineum_20[refseq_20GCF_5F000478725.1_202013-11-05] 638 sequences; 243,110,105 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq154 86.0 1e-14 >seq154 Length=17905225 Score = 86.0 bits (94), Expect = 1e-14 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168 CCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACA 224 |||||||||||| |||||||||||||||||||| ||| || |||||||||||||||| Sbjct 13532034 CCGAACTGTCTCACGACGTTCTGAACCCAGCTCACGTACCGCTTTAATGGGCGAACA 13532090 Score = 84.2 bits (92), Expect = 3e-14 Identities = 83/105 (79%), Gaps = 3/105 (3%) Strand=Plus/Plus Query 109 GGTCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGAC 168 ||||||||||||||| ||| || |||||| | | |||||||| ||||| ||||| Sbjct 13927756 GGTCCTCTCGTACTAGGGAAAGT--CTCTCATGCT-CTAACGCCCACACCGGATGGGGAC 13927812 Query 169 CGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTA 213 ||||||||||| ||||| | |||||| ||||| || || ||||| Sbjct 13927813 CGAACTGTCTCACGACGCTGTGAACCAAGCTCTTGTACCGCTTTA 13927857 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780795174168