Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fagopyrum_20esculentum_20[genbank_20GCA_5F001661195.1_202016-06-07] 387,594 sequences; 1,177,687,305 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq11610 122 2e-25 seq8344 105 2e-20 >seq11610 Length=42292 Score = 122 bits (134), Expect = 2e-25 Identities = 196/279 (70%), Gaps = 2/279 (1%) Strand=Plus/Plus Query 56 AGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGA 115 ||| |||||| |||| || ||| | |||||||||||||| | ||| || | | |||| Sbjct 27020 AGGATGCAAGTGTTATCCGAAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGT 27079 Query 116 CAGGTGTGAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTG-CACGACTAGAGT 174 | | || ||||||| ||||| |||| | | || | | ||| || | | |||| Sbjct 27080 CCGCCGTCAAATCCCAGGGCTCAACCCTGAACAGGCGGTGGAAACTATCAAGT-TGGAGT 27138 Query 175 GTGTCAGAGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAAC 234 | | || | |||||| | ||| ||| ||||||||| |||| || | | |||| Sbjct 27139 ACGGTAAGGGCAGAGGGAATTTCCGGTGGAGCGGTGAAATGCATAGAGATCGGAAAGAAC 27198 Query 235 ACCAATGGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGA 294 ||||| |||||| ||| | ||||| |||||||| || | |||||||| ||||| Sbjct 27199 ACCAACGGCGAAAGCACTCTACTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGA 27258 Query 295 GCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAA 333 || || ||||||||||||| ||||||| ||| |||| Sbjct 27259 GCGAATGGGATTAGATACCCCAGTAGTCCTAGCCGTAAA 27297 >seq8344 Length=33479 Score = 105 bits (116), Expect = 2e-20 Identities = 112/148 (76%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 190 GGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGC 249 |||||| | || ||| ||||||||| || | || | | ||||||||| |||||| || Sbjct 13967 GGAATTTCCGTTGGAGCGGTGAAATGCATAAAGATCGGAAAGAACACCAACGGCGAAAGC 13908 Query 250 AGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGA 309 | | ||||| |||||||| || | |||||||| ||||||| || |||||||| Sbjct 13907 ACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATGGGATTAGA 13848 Query 310 TACCCTGGTAGTCCACGCCCTAAACGAT 337 |||||| ||||||| ||| |||||||| Sbjct 13847 TACCCTAGTAGTCCTAGCCGTAAACGAT 13820 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1284601587776