Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fagopyrum_20esculentum_20[genbank_20GCA_5F001661195.1_202016-06-07] 387,594 sequences; 1,177,687,305 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq27105 91.5 1e-16 seq5293 77.0 3e-12 seq15567 73.4 4e-11 seq4959 73.4 4e-11 >seq27105 Length=8078 Score = 91.5 bits (100), Expect = 1e-16 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 55 ATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGAC 114 |||||||| | ||||||||||||||||||||||| ||||||| || | || || Sbjct 8020 ATACCAGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGAT 7961 Query 115 GTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGT 149 |||||| || |||| |||||||||||| ||||||| Sbjct 7960 GTATAGAGTCTGACACCTGCCCGGTGCTGGAAGGT 7926 >seq5293 Length=36742 Score = 77.0 bits (84), Expect = 3e-12 Identities = 66/82 (80%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||| |||||||||| ||| ||||| || ||| | |||| ||| ||| Sbjct 36154 GCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGTAAGACCATGTATGGGGGCTGA 36213 Query 128 CGCCTGCCCGGTGCCGGAAGGT 149 ||||||||| |||||||||||| Sbjct 36214 CGCCTGCCCAGTGCCGGAAGGT 36235 >seq15567 Length=14350 Score = 73.4 bits (80), Expect = 4e-11 Identities = 67/85 (79%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||| |||||||||| || ||||| || ||| | |||| ||| ||| Sbjct 6481 GCGACTGTTTACCAAAAACACAGGTCTTCGCAAAGTCGTAAGACCATGTATGGGGGCTGA 6422 Query 128 CGCCTGCCCGGTGCCGGAAGGTTAA 152 ||||||||| |||||||||||| || Sbjct 6421 CGCCTGCCCAGTGCCGGAAGGTCAA 6397 >seq4959 Length=33700 Score = 73.4 bits (80), Expect = 4e-11 Identities = 63/78 (81%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 72 CTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGACGCC 131 ||||||||||||||||||| ||||||| || | || || |||||| || |||| || Sbjct 19462 CTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGATGTATAGAGTCTGACACC 19403 Query 132 TGCCCGGTGCCGGAAGGT 149 | |||||||| ||||||| Sbjct 19402 TTCCCGGTGCAGGAAGGT 19385 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475009703314