Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fagopyrum_20esculentum_20[genbank_20GCA_5F001661195.1_202016-06-07] 387,594 sequences; 1,177,687,305 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq189388 120 6e-25 seq22879 102 2e-19 seq2212 77.0 6e-12 seq369 75.2 2e-11 >seq189388 Length=17252 Score = 120 bits (132), Expect = 6e-25 Identities = 113/144 (78%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 |||| ||| || |||| |||||||| ||| || ||||||||||||| ||||| |||||| Sbjct 144 GCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCC 85 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126 ||||||||||||||||||| |||||| | ||| || || || |||| ||| | || Sbjct 84 GGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCGAAAAGACCAGCTAAGCATCATTGG 25 Query 127 CTTGGTGGGCTATTATCTCACCAA 150 |||||| || ||| || ||||| Sbjct 24 CTTGGTCAGCCTTTACCTGACCAA 1 >seq22879 Length=9061 Score = 102 bits (112), Expect = 2e-19 Identities = 70/79 (89%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 42 CCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACC 101 |||||||||||||||||||||||||||||||| ||||||||||| |||||| | ||| || Sbjct 4874 CCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTATCTCAGTCCCAGTGTGGCTGATCATCC 4815 Query 102 TCTCAGTCCGGCTACCGAT 120 |||| | || ||||| ||| Sbjct 4814 TCTCGGACCAGCTACTGAT 4796 >seq2212 Length=49406 Score = 77.0 bits (84), Expect = 6e-12 Identities = 65/79 (82%), Gaps = 1/79 (1%) Strand=Plus/Minus Query 26 CATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCA 85 ||||| | || || ||||||| | ||||||| |||||||||||| ||||||||||||| | Sbjct 18457 CATTGCGAAAAATTCCCCACTACGGCCTCCCATAGGAGTCTGGGTCGTGTCTCAGTCCTA 18398 Query 86 ATGTGGCCGTTCA-ACCTC 103 ||||| | ||| ||||| Sbjct 18397 GTGTGGATGATCATACCTC 18379 >seq369 Length=91026 Score = 75.2 bits (82), Expect = 2e-11 Identities = 58/69 (84%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 33 CAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAATGTGGC 92 ||| || ||||||||||||| || || |||||| ||| ||||||||||||||| |||||| Sbjct 60075 CAAGATTCCCCACTGCTGCCCCCTGTGGGAGTCCGGGTCGTGTCTCAGTCCCAGTGTGGC 60134 Query 93 CGTTCAACC 101 | ||| || Sbjct 60135 TGATCATCC 60143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 994530261504