Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fagopyrum_20esculentum_20[genbank_20GCA_5F001661195.1_202016-06-07] 387,594 sequences; 1,177,687,305 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq7918 102 1e-19 seq21980 93.3 7e-17 seq5014 84.2 4e-14 seq27960 80.6 4e-13 seq19484 78.8 2e-12 >seq7918 Length=24972 Score = 102 bits (112), Expect = 1e-19 Identities = 98/123 (80%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || ||| | | ||||||| ||||| || ||| || |||| Sbjct 22759 GTACGAGAGGAACCGTTGA-TTC-GCACAATTGGTCATTGCGCTTGGTTGAAAAGCCAGT 22816 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||||| | | |||||||| |||||||||| ||||||||||||| |||| Sbjct 22817 GGCGCGAAGCTACCGTGCGTAGGATTATGACTGAACGCCTATAAGTCAGAATCCGGGCCA 22876 Query 121 GAA 123 ||| Sbjct 22877 GAA 22879 >seq21980 Length=9569 Score = 93.3 bits (102), Expect = 7e-17 Identities = 96/123 (78%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||| |||||||||| || ||| | | ||||||| | ||| || ||| || ||| Sbjct 5286 GTACAAGAGGAACCGTTGA-TTC-GCACAATTGGTCATCGCGCTTGGTTGAAAAGCTAGT 5229 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | || ||||||||| | | ||||||||| |||||||||||||||||||||||| |||| Sbjct 5228 GGCGTGAAGCTACCGTGCGTTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCCA 5169 Query 121 GAA 123 ||| Sbjct 5168 GAA 5166 >seq5014 Length=50481 Score = 84.2 bits (92), Expect = 4e-14 Identities = 94/123 (76%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||| ||||||||| | || ||| ||| |||||| | ||| || ||| || |||| Sbjct 19507 GTAGGAGAGGAACTGTTGA-TTC-GAACGATTGGTCATCGCGCTTGGTTGAAAAGCCAGT 19450 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | || |||||||| | | ||||||||| |||||| ||||||||||||||||| |||| Sbjct 19449 GGTGCAAAGCTACCGTGCGTTGGATTATGACTGAACACCTCTAAGTCAGAATCCGGGCCA 19390 Query 121 GAA 123 ||| Sbjct 19389 GAA 19387 >seq27960 Length=7820 Score = 80.6 bits (88), Expect = 4e-13 Identities = 93/123 (76%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||| | || |||||| || ||| | | ||||||| | ||| || ||| || ||| Sbjct 5378 GTATGTGAAGAACCGTTGA-TTC-GCACAATTGGTCATGGCGCTTGATTGAAAAGCAAGT 5435 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | || ||||||||| | | ||||||||| |||||||||||||||||||||||| || | Sbjct 5436 GGCGTGAAGCTACCGTGCGTTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCTA 5495 Query 121 GAA 123 ||| Sbjct 5496 GAA 5498 >seq19484 Length=11097 Score = 78.8 bits (86), Expect = 2e-12 Identities = 94/125 (75%), Gaps = 6/125 (5%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGC--TGTCTGACCAGGCA 58 ||||||||||||||| || || | | |||| || | |||| || || ||||| Sbjct 6497 GTACGAGAGGAACCGTTGATTT--GCACAATTTGTCAT--CGGCCTTGGTTGTAAAGGCA 6442 Query 59 GTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||| |||||||||||| | ||||||||| |||||| ||||||||| ||| ||| || Sbjct 6441 GTGGCGCGAAGCTACCGTGCATTGGATTATGACTGAACACCTCTAAGTAAGATTCCGGGC 6382 Query 119 CAGAA 123 ||||| Sbjct 6381 CAGAA 6377 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 816124054016