Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fagopyrum_20esculentum_20[genbank_20GCA_5F001661195.1_202016-06-07]
387,594 sequences; 1,177,687,305 total letters
Query= NC_031903.1
Length=172345
Score E
Sequences producing significant alignments: (Bits) Value
seq5412 383 2e-101
seq8546 246 3e-60
seq25216 197 2e-45
seq59 188 8e-43
seq29420 181 1e-40
seq3927 131 2e-25
seq8630 111 2e-19
seq13559 87.8 2e-12
seq4835 82.4 8e-11
>seq5412
Length=31808
Score = 383 bits (424), Expect = 2e-101
Identities = 502/693 (72%), Gaps = 8/693 (1%)
Strand=Plus/Minus
Query 159849 GGTTCGGCGTCCTGATGATCCCAACTCTGTTGGCAGCAACTATCTGC-TTCATCGTCGCC 159907
|||| ||||| ||||||| || || | ||| | ||||| ||| | || || | |||
Sbjct 15283 GGTTTGGCGTTTTGATGATTCCTACCTTATTGACCGCAAC-ATCCGTATTTATTATAGCC 15225
Query 159908 TTCATCGCTGCTCCCCCTGTGGACATCGATGGCATCCGTGAACCCGTCGCTGGTTCACTC 159967
||||| |||||||| || || || || ||||| || |||||||| || ||| || ||
Sbjct 15224 TTCATTGCTGCTCCTCCGGTAGATATTGATGGTATTCGTGAACCTGTTTTTGGATCTCTT 15165
Query 159968 ATGTACGGTAACAACATCATCTCTGGTGCAGTTGTTCCCTCTTCCAACGCAATTGGTCTT 160027
| ||||| ||||| || ||||||||||| || ||| ||| || || ||| |
Sbjct 15164 CTTTACGGAAACAATATTATCTCTGGTGCCATTATTCAGACTTTTGCTGCTATAGGTTTG 15105
Query 160028 CACTTCTATCCCATTTGGGAAGCCGCATCGCTCGACGAGTGGCTCTATAACGGTGGTCCT 160087
||||| ||||| || |||||||| ||||| | || || ||| | || || ||||||||
Sbjct 15104 CACTTTTATCCAATATGGGAAGCTGCATCTGTTGATGAATGGTTATACAATGGTGGTCCA 15045
Query 160088 TTCCAACTCGTAGTCTTCCACTTCCTGATCGGCATCTATGCCTATATGGGTCGTGAGTGG 160147
| | || | || || |||||| | | || | | || |||||||||||||||
Sbjct 15044 TATGAGCTAATTGTTTTTCACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGG 14985
Query 160148 GAACTCTCTTACCGTCTCGGTATGCGTCCCTGGATCTGTGTTGCATACTCTGCTCCAGTC 160207
||||| || |||||| |||||||| || ||||| |||||| || || || || ||
Sbjct 14984 GAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGTTGTTGCGTATTCAGCCCCTGTT 14925
Query 160208 GCTGCTGCTTCTGCTGTATTCCTCGTCTACCCCTTCGGTCAGGGTTCTTTCTCCGATGCT 160267
|| ||||| ||||||| ||| | ||||||| | ||| | || || || ||| |
Sbjct 14924 GCGACTGCTACTGCTGTTTTCTTGATCTACCCAATTGGTTAAGGAAGCTTTTCTAATGGT 14865
Query 160268 ATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGCTTGTATTCCAAGCAGAACACAAT 160327
|||||||| || || ||||||||||| |||| ||| |||||||||| || || |||||
Sbjct 14864 ATGCCTCTAGGAATTTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAAC 14805
Query 160328 ATCCTTATGCATCCGTTCCACATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTGTTC 160387
||||||||||| || || |||||| | || || ||||| ||||||| || | || |||
Sbjct 14804 ATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGACGGCTACCTATTC 14745
Query 160388 TCTGCTATGCATGGATCTCTGGTTACTTCTAGTCTCGTCAGAGAGACGACAGAAACTGAG 160447
| |||||| ||| |||| || || ||| | |||| || || ||||||| |||
Sbjct 14744 ------AGGCATGGTTCTTTGGTAACCTCGAGTTTGATCAGGGAAACCACAGAAAATGAA 14691
Query 160448 TCCCAGAACTATGGTTACAAGTTCGGTCAAGAGGAAGAGACTTACAACATCGTCGCAGCA 160507
|| || | ||||||| | | |||||||||||||||||||| || ||||| || ||
Sbjct 14690 TCTGCTAATGAAGGTTACAGGCTTGGTCAAGAGGAAGAGACTTATAATATCGTAGCTGCT 14631
Query 160508 CATGGCTACTTCGGTCGTTTGATCTTCCAATAT 160540
||||| || || || || || ||||||||||||
Sbjct 14630 CATGGTTATTTTGGCCGATTAATCTTCCAATAT 14598
Score = 84.2 bits (92), Expect = 2e-11
Identities = 100/136 (74%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 160653 TCAACTTCAACCAGTCCATCTTGGACAACCAAGGACAAGTTCTGAACACTTGGGCAGACG 160712
|||| |||||||| || | | || | ||||| | || | || |||||||| ||
Sbjct 14596 TCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACTTGGGCTGATA 14537
Query 160713 TGCTTAACCGCGCTGGTCTGGGCATGGAAGTCATGCACGAGCGTAACGCTCACAACTTCC 160772
| |||||||| || || || |||||||| ||||| || ||||| |||| |||||||
Sbjct 14536 TTATTAACCGCACTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCCTAACTTCC 14477
Query 160773 CTCTCGACCTTGCTGC 160788
|||||||||| || ||
Sbjct 14476 CTCTCGACCTAGCAGC 14461
>seq8546
Length=31398
Score = 246 bits (272), Expect = 3e-60
Identities = 321/444 (72%), Gaps = 4/444 (1%)
Strand=Plus/Minus
Query 160346 CACATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTGTTCTCTGCTATGCATGGATCT 160405
|||||| | || || ||||| |||||||| || || | ||| || ||||||||| |||
Sbjct 13204 CACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCATATTCAGTGTTATGCATGGTTCT 13145
Query 160406 CTGGTTACTTCTAGTCTCGTCAGAGAGACGACAGAAACTGAGTCCCAGAACTATGGTTAC 160465
|||| || |||||| | |||| || || ||||||| | | ||| || | ||||||
Sbjct 13144 TTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATAAATCCGCTAATGAAGGTTAC 13085
Query 160466 AAGTTCGGTCAAGAGGAAGAGACTTACAACATCGTCGCAGCACATGGCTACTTCGGTCGT 160525
| || ||||||||||| || ||| | || || || || || ||||| || || || ||
Sbjct 13084 AGATTTGGTCAAGAGGAGGAAACTAAGAATATTGTAGCTGCTCATGGTTATTTTGGCCGA 13025
Query 160526 TTGATCTTCCAATATGCATCCTTTAACAACTCACGCTCTCTGCACTTCTTCCTCGCTGCT 160585
|| |||||||||||||| || ||| | || | ||| | || |||||| | | ||||
Sbjct 13024 TTCATCTTCCAATATGCTAGTTTCAACGATTCTCATTCTTTACATTTCTTCTTAGTTGCT 12965
Query 160586 TGGCCTGTTGTTGGAATCTGGTTCACTGCCCTTGGTGTTTCTACCATGGCATTCAATCTC 160645
|||||||| || || || ||||| ||| | | ||| || ||| |||||||| | ||
Sbjct 12964 TGGCCTGTAGTAGGTATATGGTTTACTACTTTAGGTATTAGTACTATGGCATTTATCCTA 12905
Query 160646 AATGGTTTCAACTTCAACCAGTCCATCTTGGACAACCAAGGACAAGTTCTGAACACTTGG 160705
|| || ||||| |||||||| || | | || | ||||| | || || ||||
Sbjct 12904 AACGGCTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGT----AATTATTGG 12849
Query 160706 GCAGACGTGCTTAACCGCGCTGGTCTGGGCATGGAAGTCATGCACGAGCGTAACGCTCAC 160765
|| || | ||||||||||| || || |||||||| ||||| || ||||| |||||
Sbjct 12848 GCCGATATTATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCAT 12789
Query 160766 AACTTCCCTCTCGACCTTGCTGCT 160789
||||||| ||| ||||| ||||||
Sbjct 12788 AACTTCCATCTAGACCTAGCTGCT 12765
>seq25216
Length=8180
Score = 197 bits (218), Expect = 2e-45
Identities = 215/284 (76%), Gaps = 1/284 (0%)
Strand=Plus/Minus
Query 160166 GGTATGCGTCCCTGGATCTGTGTTGCATACTCTGCTCCAGTCGCTGCTGCTTCTGCTGTA 160225
|||||||| || ||||| | |||| || || ||||| || || |||||| |||||||
Sbjct 7253 GGTATGCGCCCTTGGATTGCTATTGCGTATTCAGCTCCTGTTGCGGCTGCTACTGCTGTT 7194
Query 160226 TTCCTCGTCTACCCCTTCGGTCAGGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCT 160285
||| | ||||||| | ||||| || || || |||| ||||||||| || || |||
Sbjct 7193 TTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGAATTTCT 7134
Query 160286 GGTACTTTTAACTATATGCTTGTATTCCAAGCAGAACACAATATCCTTATGCATCCGTTC 160345
|||||||| |||| ||| |||||||||| | || ||||| ||||||||||| || ||
Sbjct 7133 GGTACTTTCAACTTCATGATTGTATTCCAGTCTGAGCACAACATCCTTATGCACCCATTT 7074
Query 160346 CACATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTGTTCTCTGCTATGCATGGATCT 160405
|||||| | || || | ||| |||||||| || || || ||| |||||||||||| |||
Sbjct 7073 CACATGTTAGGCGTAGATGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCT 7014
Query 160406 CTGGTTACTTCTAGTCTCGTCAGAGAGACGACAGAAACTGAGTC 160449
|||| || || ||| | |||| || || ||| ||| ||| ||
Sbjct 7013 TTGGTAACCTCGAGTTTGATCAG-GAAACCACATAAAATGAATC 6971
>seq59
Length=339703
Score = 188 bits (208), Expect = 8e-43
Identities = 196/257 (76%), Gaps = 0/257 (0%)
Strand=Plus/Plus
Query 160256 TTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGCTTGTATTCCAA 160315
|| || |||| ||||||||| || | ||||||||||| |||| ||| ||||||||||
Sbjct 52309 TTTTCTGATGGTATGCCTCTAGGAGTTTCTGGTACTTTCAACTTCATGATTGTATTCCAT 52368
Query 160316 GCAGAACACAATATCCTTATGCATCCGTTCCACATGCTCGGTGTTGCTGGGGTATTCGGT 160375
|| || ||||| ||||||||||| || || |||||| | | || ||||| ||||||||
Sbjct 52369 GCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAAGCGTAGCTGGTGTATTCGGC 52428
Query 160376 GGATCTCTGTTCTCTGCTATGCATGGATCTCTGGTTACTTCTAGTCTCGTCAGAGAGACG 160435
|| || || ||| || ||||||||| ||| |||| || || ||| | | || || ||
Sbjct 52429 GGCTCCCTATTCAGTGTTATGCATGGTTCTTTGGTAACCTCGAGTTTGATTAGGGAAACC 52488
Query 160436 ACAGAAACTGAGTCCCAGAACTATGGTTACAAGTTCGGTCAAGAGGAAGAGACTTACAAC 160495
||||||| ||| || || | ||||||| ||| |||||||||||||||||||| ||
Sbjct 52489 ACAGAAAATGAATCTACTAATGAAGGTTACAGGTTTGGTCAAGAGGAAGAGACTTATAAT 52548
Query 160496 ATCGTCGCAGCACATGG 160512
|| || || | |||||
Sbjct 52549 ATTGTAGCTACTCATGG 52565
>seq29420
Length=7120
Score = 181 bits (200), Expect = 1e-40
Identities = 256/360 (71%), Gaps = 0/360 (0%)
Strand=Plus/Plus
Query 159916 TGCTCCCCCTGTGGACATCGATGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTACGG 159975
|||||| || || || || ||||| || |||||||| || |||| || || | ||||
Sbjct 3415 TGCTCCTCCGGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTTCACGG 3474
Query 159976 TAACAACATCATCTCTGGTGCAGTTGTTCCCTCTTCCAACGCAATTGGTCTTCACTTCTA 160035
||||| || |||||||||| || |||| |||| || || ||| | ||||| ||
Sbjct 3475 AAACAATATTATCTCTGGTGACATTATTCCGACTTCTGCTGCTATAGGTTTGCACTTTTA 3534
Query 160036 TCCCATTTGGGAAGCCGCATCGCTCGACGAGTGGCTCTATAACGGTGGTCCTTTCCAACT 160095
||| || |||||||| ||||| | || || ||| | || || |||||||||| | ||
Sbjct 3535 TCCAATATGGGAAGCTGCATCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCT 3594
Query 160096 CGTAGTCTTCCACTTCCTGATCGGCATCTATGCCTATATGGGTCGTGAGTGGGAACTCTC 160155
|| || |||||| | | || | | || ||||||||||||||||||||
Sbjct 3595 AAATGTTTTGCACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAG 3654
Query 160156 TTACCGTCTCGGTATGCGTCCCTGGATCTGTGTTGCATACTCTGCTCCAGTCGCTGCTGC 160215
|| |||||| |||||||| || ||||| |||||| || || | ||| || || |||||
Sbjct 3655 TTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCGTATTCAGTTCCTGTTGCGGCTGC 3714
Query 160216 TTCTGCTGTATTCCTCGTCTACCCCTTCGGTCAGGGTTCTTTCTCCGATGCTATGCCTCT 160275
| || || | ||| | ||||||| | ||||| || || || |||| |||||||||
Sbjct 3715 TACTACTATTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCT 3774
>seq3927
Length=49767
Score = 131 bits (144), Expect = 2e-25
Identities = 179/246 (73%), Gaps = 3/246 (1%)
Strand=Plus/Plus
Query 161803 TGGAATTTTGTGGCGCTCCACGGGGCTTTCGCTCTGATTGGATTCATGCTTCGTCAGTTT 161862
|||| |||||| || ||||| || ||||| | || || || || ||| | ||||| |||
Sbjct 26007 TGGACTTTTGTTGCTCTCCATGGCGCTTTTGGACTAATAGGTTTTATGTTACGTCAATTT 26066
Query 161863 GAACTTGCTCG-TCTTATCGGTATCCGTCCTTACAATGCTATTGCTTTCTCTGGTCCTAT 161921
||||||||||| ||| || | | || ||||| ||||| || || || | |||||| ||
Sbjct 26067 GAACTTGCTCGATCTGTTCAAT-TGCGACCTTATAATGCAATAGCATTATTTGGTCCAAT 26125
Query 161922 TGCTGTTTTTGTCAGCGTCTTTCTCATATATCCTCTGGGACAGTCGTCCTGGTTCTTCGC 161981
||| ||||||| || ||||| || ||||| || || ||||| |||||||| ||
Sbjct 26126 TGCCATTTTTGTTTCGGTGTTTCTAATTTATCCACTAGGTCAGTCTGGTTGGTTCTTTGC 26185
Query 161982 GCCATCGTTTGGGGTTGCCGCTATTTTCAGGTTCTTACTTTTCCTACAAGGTTTCCACAA 162041
||| ||||| || || |||| ||| | ||| | || || | ||||| || || ||
Sbjct 26186 GCCTAGTTTTGGTGTAGCATCTATATTC-GATTCATCCTCTTTTTTCAAGGGTTTCATAA 26244
Query 162042 TTGGAC 162047
||||||
Sbjct 26245 TTGGAC 26250
>seq8630
Length=23577
Score = 111 bits (122), Expect = 2e-19
Identities = 131/176 (74%), Gaps = 1/176 (1%)
Strand=Plus/Plus
Query 160417 TAGTCTCGTCAGAGAGACGACAGAAACTGAGTCCCAGAACTATGGTTACAAGTTCGGTCA 160476
|||| | |||| || | ||| ||| ||| ||| || | |||||||| || |||||
Sbjct 7454 TAGTTTGATCAGGGAACCCACATAAAATGAATCCGCTAATGAAGGTTACAAATTTGGTCA 7513
Query 160477 AGAGGAAGAGACTTACAACATCGT-CGCAGCACATGGCTACTTCGGTCGTTTGATCTTCC 160535
|||||| || ||||| || ||||| ||| || ||||| || || ||||| || |||||||
Sbjct 7514 AGAGGAGGAAACTTAGAATATCGTACGCTGCTCATGGTTATTTTGGTCGATTCATCTTCC 7573
Query 160536 AATATGCATCCTTTAACAACTCACGCTCTCTGCACTTCTTCCTCGCTGCTTGGCCT 160591
||||||| || ||||| || || ||| | || ||||| | || |||||||||
Sbjct 7574 AATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTATTAGCCGCTTGGCCT 7629
>seq13559
Length=16232
Score = 87.8 bits (96), Expect = 2e-12
Identities = 108/148 (73%), Gaps = 0/148 (0%)
Strand=Plus/Minus
Query 160376 GGATCTCTGTTCTCTGCTATGCATGGATCTCTGGTTACTTCTAGTCTCGTCAGAGAGACG 160435
|| || || ||| |||||||||||| ||| |||| || ||||| | |||| || ||
Sbjct 5671 GGCTCCCTATTCAGTGCTATGCATGGTTCTTTGGTAACCTCTAGCTTGATCAGGGAAACC 5612
Query 160436 ACAGAAACTGAGTCCCAGAACTATGGTTACAAGTTCGGTCAAGAGGAAGAGACTTACAAC 160495
| ||||| ||| | || | |||||||| || ||||||||||| | ||||| ||
Sbjct 5611 ATAGAAAATGAATATGCTAATGAAGGTTACAAATTTGGTCAAGAGGAGAAAACTTAGAAT 5552
Query 160496 ATCGTCGCAGCACATGGCTACTTCGGTC 160523
||||| || || ||||| || |||| ||
Sbjct 5551 ATCGTAGCTGCTCATGGTTATTTCGATC 5524
>seq4835
Length=43218
Score = 82.4 bits (90), Expect = 8e-11
Identities = 100/136 (74%), Gaps = 4/136 (3%)
Strand=Plus/Plus
Query 160460 GGTTACAAGTTCGGTCAAGAGGAAGAGACTTACAACATCGTCGCAGCACATGGCTACTTC 160519
||||||| || ||||||||||| || ||||| || ||||| || || ||||| || ||
Sbjct 9059 GGTTACAGATTTGGTCAAGAGGAGGAAACTTAGAATATCGTAGCTGCTCATGGTTATTTT 9118
Query 160520 GGTCGTTTGATCTTCCAATATGCATCCTTTAACAACTCACGCTCT----CTGCACTTCTT 160575
|| | || |||||||||||||| || ||||| || || ||| | || |||||
Sbjct 9119 GGCAGATTCATCTTCCAATATGCTAGTTTCAACAAATCTCGTTCTTTAATTACATTTCTT 9178
Query 160576 CCTCGCTGCTTGGCCT 160591
| || |||||||||
Sbjct 9179 ATTAGCCGCTTGGCCT 9194
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548704624633200
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