Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fagopyrum_20esculentum_20[genbank_20GCA_5F001661195.1_202016-06-07]
387,594 sequences; 1,177,687,305 total letters
Query= NC_031906.1
Length=198190
Score E
Sequences producing significant alignments: (Bits) Value
seq5412 307 1e-78
seq8546 239 6e-58
seq29420 154 2e-32
seq25216 154 2e-32
seq59 147 3e-30
seq8630 104 3e-17
seq4835 89.7 6e-13
>seq5412
Length=31808
Score = 307 bits (340), Expect = 1e-78
Identities = 491/697 (70%), Gaps = 16/697 (2%)
Strand=Plus/Minus
Query 188897 GGTTCGGTGTCCTGATGATCCCTACGCTTCTCG-CTGCAACCATCTGC-TTCATCGTCGC 188954
|||| || || ||||||| ||||| ||| | | | ||||| ||| | || || | ||
Sbjct 15283 GGTTTGGCGTTTTGATGATTCCTAC-CTTATTGACCGCAAC-ATCCGTATTTATTATAGC 15226
Query 188955 CTTTGTCGCTGCACCCCCTGTAGACATTGATGGCATCCGCGAACCCGTCGCTGGTTCACT 189014
||| | ||||| || || ||||| |||||||| || || ||||| || ||| || ||
Sbjct 15225 CTTCATTGCTGCTCCTCCGGTAGATATTGATGGTATTCGTGAACCTGTTTTTGGATCTCT 15166
Query 189015 CATGTATGGAAACAACATCATCTCTGGTGCTGTTGTCCCTTCATCCAACGCAATTGGTCT 189074
| || |||||||| || ||||||||||| || | | | | || || ||| |
Sbjct 15165 TCTTTACGGAAACAATATTATCTCTGGTGCCATTATTCAGACTTTTGCTGCTATAGGTTT 15106
Query 189075 TCACTTCTACCCCATCTGGGAAGCCGCCTCACTCGATGAGTGGCTCTACAACGGTGGTCC 189134
||||| || || || |||||||| || || | ||||| ||| | ||||| ||||||||
Sbjct 15105 GCACTTTTATCCAATATGGGAAGCTGCATCTGTTGATGAATGGTTATACAATGGTGGTCC 15046
Query 189135 TTTCCAACTGGTAGTCTTCCACTTCCTCATCGGCATCTACGCCT---ACATGGGTCGTGA 189191
| | || | || || |||||| | | || | || || | |||||||||||||
Sbjct 15045 ATATGAGCTAATTGTTTTTCACTTCTTACTTGG--TGTA-GCTTGTTACATGGGTCGTGA 14989
Query 189192 GTGGGAACTCTCTTACCGTCTCGGTATGCGTCCTTGGATCTGCATTGCTTACTCTGCACC 189251
||||||||| || |||||| |||||||| |||||||| |||| || || || ||
Sbjct 14988 GTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGTTGTTGCGTATTCAGCCCC 14929
Query 189252 TGTTGCAGCAGCATCCGCAGTCTTTCTGGTCTATCCTTTTGGTCAAGGTTCTTTCTCTGA 189311
|||||| | || | || || || || |||| || ||||| |||| || ||| |
Sbjct 14928 TGTTGCGACTGCTACTGCTGTTTTCTTGATCTACCCAATTGGTTAAGGAAGCTTTTCTAA 14869
Query 189312 CGCAATGCCCTTGGGTATCAGTGGAACCTTCAACTACATGCTTGTCTTCCAAGCAGAGCA 189371
| ||||| | || || ||| || ||||||| |||| |||| ||||| || |||||
Sbjct 14868 TGGTATGCCTCTAGGAATTTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCA 14809
Query 189372 CAACATCCTGATGCACCCCTTCCACATGCTGGGAGTCGCAGGTGTCTTCGGTGGTTCACT 189431
||||||||| |||||||| || |||||| | || || || ||||| |||| || | ||
Sbjct 14808 CAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGACGGCTACCT 14749
Query 189432 GTTCTCCGCAATGCATGGTTCACTCGTTACCTCTTCACTGGTTCGTGAAACCACTGAAAC 189491
||| | ||||||||| | || ||||| || | | |||||||| ||||
Sbjct 14748 ATTC------AGGCATGGTTCTTTGGTAACCTCGAGTTTGATCAGGGAAACCACAGAAAA 14695
Query 189492 CGAGTCCCAGAACTATGGTTACAAGTTTGGACAAGAAGAAGAAACGTACAACATCGTTGC 189551
|| || || | ||||||| | |||| ||||| ||||| || || || ||||| ||
Sbjct 14694 TGAATCTGCTAATGAAGGTTACAGGCTTGGTCAAGAGGAAGAGACTTATAATATCGTAGC 14635
Query 189552 TGCTCATGGATATTTCGGTCGTCTTATCTTCCAATAT 189588
||||||||| ||||| || || | ||||||||||||
Sbjct 14634 TGCTCATGGTTATTTTGGCCGATTAATCTTCCAATAT 14598
Score = 113 bits (124), Expect = 6e-20
Identities = 107/137 (78%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 189701 TCAACTTCAATCAATCCATTCTTGATGGTCAAGGTCGTGTTCTGAACACATGGGCAGACG 189760
|||| ||||| ||||| | ||||| ||||||||||||| | || || ||||| ||
Sbjct 14596 TCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACTTGGGCTGATA 14537
Query 189761 TTCTCAACCGTGCTGGTCTTGGTATGGAAGTCATGCATGAGCGTAACGCTCACAACTTCC 189820
|| | ||||| || |||||||||||||| |||||||| ||||| |||| |||||||
Sbjct 14536 TTATTAACCGCACTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCCTAACTTCC 14477
Query 189821 CTCTTGATCTGGCAGCA 189837
|||| || || ||||||
Sbjct 14476 CTCTCGACCTAGCAGCA 14460
>seq8546
Length=31398
Score = 239 bits (264), Expect = 6e-58
Identities = 319/443 (72%), Gaps = 4/443 (1%)
Strand=Plus/Minus
Query 189394 CACATGCTGGGAGTCGCAGGTGTCTTCGGTGGTTCACTGTTCTCCGCAATGCATGGTTCA 189453
|||||| | || || || ||||| ||||| || || | ||| | |||||||||||
Sbjct 13204 CACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCATATTCAGTGTTATGCATGGTTCT 13145
Query 189454 CTCGTTACCTCTTCACTGGTTCGTGAAACCACTGAAACCGAGTCCCAGAACTATGGTTAC 189513
| || |||||| || | | |||||||| |||| | ||| || | ||||||
Sbjct 13144 TTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATAAATCCGCTAATGAAGGTTAC 13085
Query 189514 AAGTTTGGACAAGAAGAAGAAACGTACAACATCGTTGCTGCTCATGGATATTTCGGTCGT 189573
| ||||| ||||| || ||||| | || || || ||||||||||| ||||| || ||
Sbjct 13084 AGATTTGGTCAAGAGGAGGAAACTAAGAATATTGTAGCTGCTCATGGTTATTTTGGCCGA 13025
Query 189574 CTTATCTTCCAATATGCATCGTTCAACAACTCCCGTTCACTTCACTTCTTCCTCGCTGCC 189633
| |||||||||||||| |||||| | || | ||| | || |||||| | | |||
Sbjct 13024 TTCATCTTCCAATATGCTAGTTTCAACGATTCTCATTCTTTACATTTCTTCTTAGTTGCT 12965
Query 189634 TGGCCAGTCGTGGGTATCTGGTTTACCGCCCTCGGCGTCAGCACCATGGCATTCAACCTC 189693
||||| || || ||||| |||||||| | | || | || || |||||||| | |||
Sbjct 12964 TGGCCTGTAGTAGGTATATGGTTTACTACTTTAGGTATTAGTACTATGGCATTTATCCTA 12905
Query 189694 AATGGGTTCAACTTCAATCAATCCATTCTTGATGGTCAAGGTCGTGTTCTGAACACATGG 189753
|| || ||||| ||||| ||||| | ||||| ||||||||||||| || |||
Sbjct 12904 AACGGCTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGT----AATTATTGG 12849
Query 189754 GCAGACGTTCTCAACCGTGCTGGTCTTGGTATGGAAGTCATGCATGAGCGTAACGCTCAC 189813
|| || || | ||||| ||| |||||||||||||| |||||||| ||||| |||||
Sbjct 12848 GCCGATATTATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCAT 12789
Query 189814 AACTTCCCTCTTGATCTGGCAGC 189836
||||||| ||| || || || ||
Sbjct 12788 AACTTCCATCTAGACCTAGCTGC 12766
>seq29420
Length=7120
Score = 154 bits (170), Expect = 2e-32
Identities = 254/361 (70%), Gaps = 8/361 (2%)
Strand=Plus/Plus
Query 188964 TGCACCCCCTGTAGACATTGATGGCATCCGCGAACCCGTCGCTGGTTCACTCATGTATGG 189023
||| || || ||||| |||||||| || || ||||| || |||| || || | | ||
Sbjct 3415 TGCTCCTCCGGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTTCACGG 3474
Query 189024 AAACAACATCATCTCTGGTGCTGTTGTCCCTTCATCCAACGCAATTGGTCTTCACTTCTA 189083
|||||| || |||||||||| || | || | || || || ||| | ||||| ||
Sbjct 3475 AAACAATATTATCTCTGGTGACATTATTCCGACTTCTGCTGCTATAGGTTTGCACTTTTA 3534
Query 189084 CCCCATCTGGGAAGCCGCCTCACTCGATGAGTGGCTCTACAACGGTGGTCCTTTCCAACT 189143
|| || |||||||| || || | ||||| ||| | ||||| |||||||||| | ||
Sbjct 3535 TCCAATATGGGAAGCTGCATCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCT 3594
Query 189144 GGTAGTCTTCCACTTCCTCATCGGCATCTACGCCT---ACATGGGTCGTGAGTGGGAACT 189200
|| || |||||| | | || | || || | ||||||||||||||||||||||
Sbjct 3595 AAATGTTTTGCACTTCTTACTTGG--TGTA-GCTTGTTACATGGGTCGTGAGTGGGAACT 3651
Query 189201 CTCTTACCGTCTCGGTATGCGTCCTTGGATCTGC-ATTGCTTACTCTGCACCTGTTGCAG 189259
|| |||||| |||||||| |||||||| ||| |||| || || | |||||||| |
Sbjct 3652 TAGTTTCCGTCTGGGTATGCGCCCTTGGAT-TGCTGTTGCGTATTCAGTTCCTGTTGCGG 3710
Query 189260 CAGCATCCGCAGTCTTTCTGGTCTATCCTTTTGGTCAAGGTTCTTTCTCTGACGCAATGC 189319
| || | | | || || |||| || |||||||||| || ||||| | ||||
Sbjct 3711 CTGCTACTACTATTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGC 3770
Query 189320 C 189320
|
Sbjct 3771 C 3771
>seq25216
Length=8180
Score = 154 bits (170), Expect = 2e-32
Identities = 187/252 (74%), Gaps = 2/252 (1%)
Strand=Plus/Minus
Query 189214 GGTATGCGTCCTTGGATCTGC-ATTGCTTACTCTGCACCTGTTGCAGCAGCATCCGCAGT 189272
|||||||| |||||||| ||| ||||| || || || |||||||| || || | || ||
Sbjct 7253 GGTATGCGCCCTTGGAT-TGCTATTGCGTATTCAGCTCCTGTTGCGGCTGCTACTGCTGT 7195
Query 189273 CTTTCTGGTCTATCCTTTTGGTCAAGGTTCTTTCTCTGACGCAATGCCCTTGGGTATCAG 189332
|| || |||| || |||||||||| || ||||| | ||||| | || ||
Sbjct 7194 TTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGAATTTC 7135
Query 189333 TGGAACCTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCCCTT 189392
||| || ||||||| |||| |||| ||||| | |||||||||||||| |||||||| ||
Sbjct 7134 TGGTACTTTCAACTTCATGATTGTATTCCAGTCTGAGCACAACATCCTTATGCACCCATT 7075
Query 189393 CCACATGCTGGGAGTCGCAGGTGTCTTCGGTGGTTCACTGTTCTCCGCAATGCATGGTTC 189452
|||||| | || || | ||||| ||||| || || || ||| || |||||||||||
Sbjct 7074 TCACATGTTAGGCGTAGATGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTC 7015
Query 189453 ACTCGTTACCTC 189464
| || |||||
Sbjct 7014 TTTGGTAACCTC 7003
>seq59
Length=339703
Score = 147 bits (162), Expect = 3e-30
Identities = 196/268 (73%), Gaps = 7/268 (3%)
Strand=Plus/Plus
Query 189304 TTCTCTGACGCAATGCC-CTTGG-GTATCAGTGGAACCTTCAACTACATGCTTGTCTTCC 189361
|| ||||| | ||||| || || || || ||| || ||||||| |||| |||| ||||
Sbjct 52309 TTTTCTGATGGTATGCCTCTAGGAGTTTC--TGGTACTTTCAACTTCATGATTGTATTCC 52366
Query 189362 AAGCAGAGCACAACATCCTGATGCACCCCTTCCACATGCTGGGAGTCGCAGGTGTCTTCG 189421
| || |||||||||||||| |||||||| || |||||| | | || || ||||| ||||
Sbjct 52367 ATGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAAGCGTAGCTGGTGTATTCG 52426
Query 189422 GTGGTTCACTGTTCTCCGCAATGCATGGTTCACTCGTTACCTCTTCACTGGTTCGTGAAA 189481
| || || || ||| | ||||||||||| | || ||||| || || | ||||
Sbjct 52427 GCGGCTCCCTATTCAGTGTTATGCATGGTTCTTTGGTAACCTCGAGTTTGATTAGGGAAA 52486
Query 189482 CCACTGAAACCGAGTCCCAGAACTATGGTTACAAGTTTGGACAAGAAGAAGAAACGTACA 189541
|||| |||| || || || | ||||||| |||||| ||||| ||||| || || |
Sbjct 52487 CCACAGAAAATGAATCTACTAATGAAGGTTACAGGTTTGGTCAAGAGGAAGAGACTTATA 52546
Query 189542 ACATCGTTGCTGCTCATGGATATTTCGG 189569
| || || ||| ||||||| ||||||
Sbjct 52547 ATATTGTAGCTACTCATGG---TTTCGG 52571
>seq8630
Length=23577
Score = 104 bits (114), Expect = 3e-17
Identities = 103/132 (78%), Gaps = 1/132 (1%)
Strand=Plus/Plus
Query 189508 GGTTACAAGTTTGGACAAGAAGAAGAAACGTACAACATCGTT-GCTGCTCATGGATATTT 189566
|||||||| ||||| ||||| || ||||| || || ||||| ||||||||||| |||||
Sbjct 7497 GGTTACAAATTTGGTCAAGAGGAGGAAACTTAGAATATCGTACGCTGCTCATGGTTATTT 7556
Query 189567 CGGTCGTCTTATCTTCCAATATGCATCGTTCAACAACTCCCGTTCACTTCACTTCTTCCT 189626
||||| | |||||||||||||| |||||||| || ||||| | || ||||| |
Sbjct 7557 TGGTCGATTCATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTATT 7616
Query 189627 CGCTGCCTGGCC 189638
|| || |||||
Sbjct 7617 AGCCGCTTGGCC 7628
>seq4835
Length=43218
Score = 89.7 bits (98), Expect = 6e-13
Identities = 101/135 (75%), Gaps = 4/135 (3%)
Strand=Plus/Plus
Query 189508 GGTTACAAGTTTGGACAAGAAGAAGAAACGTACAACATCGTTGCTGCTCATGGATATTTC 189567
||||||| ||||| ||||| || ||||| || || ||||| ||||||||||| |||||
Sbjct 9059 GGTTACAGATTTGGTCAAGAGGAGGAAACTTAGAATATCGTAGCTGCTCATGGTTATTTT 9118
Query 189568 GGTCGTCTTATCTTCCAATATGCATCGTTCAACAACTCCCGTTC----ACTTCACTTCTT 189623
|| | | |||||||||||||| |||||||| || ||||| | | || |||||
Sbjct 9119 GGCAGATTCATCTTCCAATATGCTAGTTTCAACAAATCTCGTTCTTTAATTACATTTCTT 9178
Query 189624 CCTCGCTGCCTGGCC 189638
| || || |||||
Sbjct 9179 ATTAGCCGCTTGGCC 9193
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 631007929956000
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