Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fagopyrum_20esculentum_20[genbank_20GCA_5F001661195.1_202016-06-07] 387,594 sequences; 1,177,687,305 total letters Query= NC_031922.1 Length=174830 Score E Sequences producing significant alignments: (Bits) Value seq5412 426 2e-114 seq8546 244 1e-59 seq29420 221 1e-52 seq25216 199 4e-46 seq59 197 2e-45 seq8630 114 1e-20 seq3927 102 9e-17 seq4835 91.5 2e-13 >seq5412 Length=31808 Score = 426 bits (472), Expect = 2e-114 Identities = 509/691 (74%), Gaps = 6/691 (1%) Strand=Plus/Minus Query 160618 GGTTCGGTGTGCTGATGATCCCAACTCTGTTGGCAGCAACCGTCTGCTTTATTACTGCGT 160677 |||| || || ||||||| || || | ||| | ||||| | ||||||| || | Sbjct 15283 GGTTTGGCGTTTTGATGATTCCTACCTTATTGACCGCAACATCCGTATTTATTATAGCCT 15224 Query 160678 TCGTTGCTGCTCCCCCCGTGGACATCGACGGTATCCGTGAACCCGTTGCTGGTTCACTGA 160737 || |||||||||| || || || || || ||||| |||||||| ||| ||| || || Sbjct 15223 TCATTGCTGCTCCTCCGGTAGATATTGATGGTATTCGTGAACCTGTTTTTGGATCTCTTC 15164 Query 160738 TGTATGGAAACAACATCATCTCTGGTGCAGTTGTTCCTTCTTCCAACGCAATTGGTCTTC 160797 | || |||||||| || ||||||||||| || ||| ||| || || ||| | | Sbjct 15163 TTTACGGAAACAATATTATCTCTGGTGCCATTATTCAGACTTTTGCTGCTATAGGTTTGC 15104 Query 160798 ACTTCTACCCCATTTGGGAAGCTGCATCTCTTGATGAATGGCTCTACAATGGTGGTCCTT 160857 |||| || || || ||||||||||||||| ||||||||||| | |||||||||||||| | Sbjct 15103 ACTTTTATCCAATATGGGAAGCTGCATCTGTTGATGAATGGTTATACAATGGTGGTCCAT 15044 Query 160858 ACCAACTGGTCGTATTTCACTTCCTGATCGGCATCTTCTGCTACATGGGTCGCGAGTGGG 160917 | | || | || ||||||||| | | || | || ||||||||||| ||||||| Sbjct 15043 ATGAGCTAATTGTTTTTCACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGG 14984 Query 160918 AACTTTCCTACCGCCTCGGCATGCGCCCCTGGATCTGCGTTGCATATTCTGCACCTGTTG 160977 ||||| | ||| || || |||||||| ||||| ||||| ||||| || ||||||| Sbjct 14983 AACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGTTGTTGCGTATTCAGCCCCTGTTG 14924 Query 160978 CTGCTGCGAGTGCAGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGGTA 161037 | |||| | ||| || ||| | |||| || | ||| |||| || ||| |||||| Sbjct 14923 CGACTGCTACTGCTGTTTTCTTGATCTACCCAATTGGTTAAGGAAGCTTTTCTAATGGTA 14864 Query 161038 TGCCCCTGGGTATCTCTGGTACCTTCAACTTCATGCTTGTCTTCCAGGCAGAACACAACA 161097 |||| || || || |||||||| |||||||||||| |||| |||||||| || ||||||| Sbjct 14863 TGCCTCTAGGAATTTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACA 14804 Query 161098 TCCTGATGCACCCCTTCCACATGTTGGGTGTTGCTGGTGTCTTCGGTGGTTCTCTGTTCT 161157 |||| |||||||| || |||||||| || || |||||||| |||| || | || ||| Sbjct 14803 TCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGACGGCTACCTATTC- 14745 Query 161158 CCGCAATGCATGGTTCACTGGTTACTTCTTCCCTGGTTCGTGAAACCACTGAGAACGAGT 161217 | ||||||||| |||| || || || | | |||||||| || || || | Sbjct 14744 -----AGGCATGGTTCTTTGGTAACCTCGAGTTTGATCAGGGAAACCACAGAAAATGAAT 14690 Query 161218 CCCAGAACTATGGTTACAAGTTTGGTCAAGAAGAAGAGACCTACAACATCGTCGCTGCTC 161277 | || | ||||||| | |||||||||| |||||||| || || ||||| ||||||| Sbjct 14689 CTGCTAATGAAGGTTACAGGCTTGGTCAAGAGGAAGAGACTTATAATATCGTAGCTGCTC 14630 Query 161278 ATGGTTACTTCGGTCGCCTGATCTTCCAATA 161308 ||||||| || || || | ||||||||||| Sbjct 14629 ATGGTTATTTTGGCCGATTAATCTTCCAATA 14599 Score = 93.3 bits (102), Expect = 5e-14 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 161422 TCAACTTCAACCAGTCCATCATGGATGGTCAGGGCAAAGTCCTGAACACCTGGGCTGACG 161481 |||| |||||||| || | | ||| |||| || || | || || |||||||| Sbjct 14596 TCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACTTGGGCTGATA 14537 Query 161482 TTCTGAATCGTGCTAACCTTGGTATGGAAGTAATGCACGAGCGTAATGCTCACAACTTCC 161541 || | || || ||||||||||||||||||| ||||| || |||||||||| ||||||| Sbjct 14536 TTATTAACCGCACTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCCTAACTTCC 14477 Query 161542 CTCTGGATCTCGCTGC 161557 |||| || || || || Sbjct 14476 CTCTCGACCTAGCAGC 14461 >seq8546 Length=31398 Score = 244 bits (270), Expect = 1e-59 Identities = 322/445 (72%), Gaps = 6/445 (1%) Strand=Plus/Minus Query 161115 CACATGTTGGGTGTTGCTGGTGTCTTCGGTGGTTCTCTGTTCTCCGCAATGCATGGTTCA 161174 |||||||| || || |||||||| ||||| || || | ||| | ||||||||||| Sbjct 13204 CACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCATATTCAGTGTTATGCATGGTTCT 13145 Query 161175 CTGGTTACTTCTTCCCTGGTTCGTGAAACCACTGAGAACGAGTCCCAGAACTATGGTTAC 161234 |||| || ||| || | | |||||||| || || | ||| || | |||||| Sbjct 13144 TTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATAAATCCGCTAATGAAGGTTAC 13085 Query 161235 AAGTTTGGTCAAGAAGAAGAGACCTACAACATCGTCGCTGCTCATGGTTACTTCGGTCGC 161294 | ||||||||||| || || || | || || || |||||||||||||| || || || Sbjct 13084 AGATTTGGTCAAGAGGAGGAAACTAAGAATATTGTAGCTGCTCATGGTTATTTTGGCCGA 13025 Query 161295 CTGATCTTCCAATACGCTTCCTTCAACAACTCCCGTTCGTTGCACTTCTTCCTCGCAGCA 161354 | ||||||||||| ||| |||||| | || | ||| || || |||||| | | || Sbjct 13024 TTCATCTTCCAATATGCTAGTTTCAACGATTCTCATTCTTTACATTTCTTCTTAGTTGCT 12965 Query 161355 TGGCCTGTTGTCGGTATCTGGTTCACTGCACTTGGTGTCTCCACCATGGCATTCAACCTG 161414 |||||||| || ||||| ||||| ||| | | ||| | || |||||||| | ||| Sbjct 12964 TGGCCTGTAGTAGGTATATGGTTTACTACTTTAGGTATTAGTACTATGGCATTTATCCTA 12905 Query 161415 AACGGATTCAACTTCAACCAGTCCATCATGGATGGTCAGGGCAAAGTCCTG-AACACCTG 161473 ||||| ||||| |||||||| || | | ||| || ||| ||| || || || Sbjct 12904 AACGGCTTCAATTTCAACCAATCTGTAGTTGATAGT-----CAAGGTCGTGTAATTATTG 12850 Query 161474 GGCTGACGTTCTGAATCGTGCTAACCTTGGTATGGAAGTAATGCACGAGCGTAATGCTCA 161533 ||| || || | || || |||||||||||||||||||| ||||| || ||||||||||| Sbjct 12849 GGCCGATATTATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCA 12790 Query 161534 CAACTTCCCTCTGGATCTCGCTGCT 161558 ||||||| ||| || || |||||| Sbjct 12789 TAACTTCCATCTAGACCTAGCTGCT 12765 >seq29420 Length=7120 Score = 221 bits (244), Expect = 1e-52 Identities = 269/364 (74%), Gaps = 2/364 (1%) Strand=Plus/Plus Query 160682 TGCTGCTCCCCCCGTGGACATCGACGGTATCCGTGAACCCGTTGCTGGTTCACTGATGTA 160741 || |||||| || || || || || ||||| |||||||| ||| |||| || || | | Sbjct 3412 TGTTGCTCCTCCGGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTTCA 3471 Query 160742 TGGAAACAACATCATCTCTGGTGCAGTTGTTCCTTCTTCCAACGCAATTGGTCTTCACTT 160801 |||||||| || |||||||||| || |||| |||| || || ||| | ||||| Sbjct 3472 CGGAAACAATATTATCTCTGGTGACATTATTCCGACTTCTGCTGCTATAGGTTTGCACTT 3531 Query 160802 CTACCCCATTTGGGAAGCTGCATCTCTTGATGAATGGCTCTACAATGGTGGTCCTTACCA 160861 || || || ||||||||||||||| ||||||||||| | ||||||||||||||||| | Sbjct 3532 TTATCCAATATGGGAAGCTGCATCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGA 3591 Query 160862 ACTGGTCGTATTTCACTTCCTGATCGGCATCTTCTGCTACATGGGTCGCGAGTGGGAACT 160921 || || || |||||| | | || | || ||||||||||| ||||||||||| Sbjct 3592 GCTAAATGTTTTGCACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACT 3651 Query 160922 TTCCTACCGCCTCGGCATGCGCCCCTGGATCTGC-GTTGCATATTCTGCACCTGTTGCTG 160980 | | ||| || || |||||||| ||||| ||| ||||| ||||| | |||||||| | Sbjct 3652 TAGTTTCCGTCTGGGTATGCGCCCTTGGAT-TGCTGTTGCGTATTCAGTTCCTGTTGCGG 3710 Query 160981 CTGCGAGTGCAGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGGTATGC 161040 |||| | | | | ||| | |||| || | |||||||| || ||||||||||||| Sbjct 3711 CTGCTACTACTATTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGC 3770 Query 161041 CCCT 161044 | || Sbjct 3771 CTCT 3774 >seq25216 Length=8180 Score = 199 bits (220), Expect = 4e-46 Identities = 197/252 (78%), Gaps = 2/252 (1%) Strand=Plus/Minus Query 160935 GGCATGCGCCCCTGGATCTGCG-TTGCATATTCTGCACCTGTTGCTGCTGCGAGTGCAGT 160993 || |||||||| ||||| ||| |||| ||||| || |||||||| ||||| | ||| || Sbjct 7253 GGTATGCGCCCTTGGAT-TGCTATTGCGTATTCAGCTCCTGTTGCGGCTGCTACTGCTGT 7195 Query 160994 ATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGGTATGCCCCTGGGTATCTC 161053 ||| | |||| || | |||||||| || |||||||||||||| || || || || Sbjct 7194 TTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGAATTTC 7135 Query 161054 TGGTACCTTCAACTTCATGCTTGTCTTCCAGGCAGAACACAACATCCTGATGCACCCCTT 161113 |||||| |||||||||||| |||| |||||| | || ||||||||||| |||||||| || Sbjct 7134 TGGTACTTTCAACTTCATGATTGTATTCCAGTCTGAGCACAACATCCTTATGCACCCATT 7075 Query 161114 CCACATGTTGGGTGTTGCTGGTGTCTTCGGTGGTTCTCTGTTCTCCGCAATGCATGGTTC 161173 |||||||| || || | |||||| ||||| || || || ||| || ||||||||||| Sbjct 7074 TCACATGTTAGGCGTAGATGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTC 7015 Query 161174 ACTGGTTACTTC 161185 |||| || || Sbjct 7014 TTTGGTAACCTC 7003 >seq59 Length=339703 Score = 197 bits (218), Expect = 2e-45 Identities = 199/259 (77%), Gaps = 0/259 (0%) Strand=Plus/Plus Query 161025 TTCTCTGATGGTATGCCCCTGGGTATCTCTGGTACCTTCAACTTCATGCTTGTCTTCCAG 161084 || |||||||||||||| || || | |||||||| |||||||||||| |||| ||||| Sbjct 52309 TTTTCTGATGGTATGCCTCTAGGAGTTTCTGGTACTTTCAACTTCATGATTGTATTCCAT 52368 Query 161085 GCAGAACACAACATCCTGATGCACCCCTTCCACATGTTGGGTGTTGCTGGTGTCTTCGGT 161144 || || ||||||||||| |||||||| || |||||||| | || |||||||| ||||| Sbjct 52369 GCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAAGCGTAGCTGGTGTATTCGGC 52428 Query 161145 GGTTCTCTGTTCTCCGCAATGCATGGTTCACTGGTTACTTCTTCCCTGGTTCGTGAAACC 161204 || || || ||| | ||||||||||| |||| || || || || | |||||| Sbjct 52429 GGCTCCCTATTCAGTGTTATGCATGGTTCTTTGGTAACCTCGAGTTTGATTAGGGAAACC 52488 Query 161205 ACTGAGAACGAGTCCCAGAACTATGGTTACAAGTTTGGTCAAGAAGAAGAGACCTACAAC 161264 || || || || || || | ||||||| |||||||||||| |||||||| || || Sbjct 52489 ACAGAAAATGAATCTACTAATGAAGGTTACAGGTTTGGTCAAGAGGAAGAGACTTATAAT 52548 Query 161265 ATCGTCGCTGCTCATGGTT 161283 || || ||| ||||||||| Sbjct 52549 ATTGTAGCTACTCATGGTT 52567 >seq8630 Length=23577 Score = 114 bits (126), Expect = 1e-20 Identities = 106/133 (80%), Gaps = 1/133 (1%) Strand=Plus/Plus Query 161229 GGTTACAAGTTTGGTCAAGAAGAAGAGACCTACAACATCGT-CGCTGCTCATGGTTACTT 161287 |||||||| ||||||||||| || || || || || ||||| ||||||||||||||| || Sbjct 7497 GGTTACAAATTTGGTCAAGAGGAGGAAACTTAGAATATCGTACGCTGCTCATGGTTATTT 7556 Query 161288 CGGTCGCCTGATCTTCCAATACGCTTCCTTCAACAACTCCCGTTCGTTGCACTTCTTCCT 161347 ||||| | ||||||||||| ||| |||||||| || ||||| || || ||||| | Sbjct 7557 TGGTCGATTCATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTATT 7616 Query 161348 CGCAGCATGGCCT 161360 || || |||||| Sbjct 7617 AGCCGCTTGGCCT 7629 >seq3927 Length=49767 Score = 102 bits (112), Expect = 9e-17 Identities = 171/246 (70%), Gaps = 1/246 (0%) Strand=Plus/Plus Query 164175 TGGGCTTTTGTGGCGTTCCACGGATCTTTCGCTCTGATCGGTTTCATGCTTCGGCAGTTT 164234 ||| ||||||| || |||| || |||| | || || ||||| ||| | || || ||| Sbjct 26007 TGGACTTTTGTTGCTCTCCATGGCGCTTTTGGACTAATAGGTTTTATGTTACGTCAATTT 26066 Query 164235 GAAATTGCACGTCTTGTAGGTATCCGTCCGTACAATGCTATTGCGTTCTCTGGTCCGATT 164294 ||| |||| || ||| | || || || ||||| || || || | |||||| ||| Sbjct 26067 GAACTTGCTCGATCTGTTCAATTGCGACCTTATAATGCAATAGCATTATTTGGTCCAATT 26126 Query 164295 GCTGTCTTTGTCAGCGTTTTCCTTATGTACCCTCTCGGGCAATCTAGTTGGTTCTTTGCC 164354 || | ||||| || || || || || || || || || ||| ||||||||||||| Sbjct 26127 GCCATTTTTGTTTCGGTGTTTCTAATTTATCCACTAGGTCAGTCTGGTTGGTTCTTTGCG 26186 Query 164355 CCCTCGTTTGGGGTCGCGGCGATCTTCAGATTCCTCTTGTTCCTCCAAGGTTTCCATAAC 164414 || ||||| || || | || ||| ||||| || | || | ||||| || ||||| Sbjct 26187 CCTAGTTTTGGTGTAGCATCTATATTC-GATTCATCCTCTTTTTTCAAGGGTTTCATAAT 26245 Query 164415 TGGACA 164420 |||||| Sbjct 26246 TGGACA 26251 >seq4835 Length=43218 Score = 91.5 bits (100), Expect = 2e-13 Identities = 102/136 (75%), Gaps = 4/136 (3%) Strand=Plus/Plus Query 161229 GGTTACAAGTTTGGTCAAGAAGAAGAGACCTACAACATCGTCGCTGCTCATGGTTACTTC 161288 ||||||| ||||||||||| || || || || || ||||| |||||||||||||| || Sbjct 9059 GGTTACAGATTTGGTCAAGAGGAGGAAACTTAGAATATCGTAGCTGCTCATGGTTATTTT 9118 Query 161289 GGTCGCCTGATCTTCCAATACGCTTCCTTCAACAACTCCCGTTC----GTTGCACTTCTT 161344 || | | ||||||||||| ||| |||||||| || ||||| || || ||||| Sbjct 9119 GGCAGATTCATCTTCCAATATGCTAGTTTCAACAAATCTCGTTCTTTAATTACATTTCTT 9178 Query 161345 CCTCGCAGCATGGCCT 161360 | || || |||||| Sbjct 9179 ATTAGCCGCTTGGCCT 9194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556618097789600