Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ficus_20carica_20[genbank_20GCA_5F002002945.1_202017-01-27] 27,995 sequences; 247,090,738 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq285 268 1e-69 seq9 86.0 9e-15 >seq285 Length=201032 Score = 268 bits (296), Expect = 1e-69 Identities = 173/188 (92%), Gaps = 1/188 (1%) Strand=Plus/Minus Query 41 TCGCGCTTACTAGGAATTTCCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCA 100 || ||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||| Sbjct 174834 TCACGCTTACTAGGAATT-CCTAGTTGAAGACCAACAATTGCAATGACCTATCCCCATCA 174776 Query 101 CGATGAAATTTCAAAGATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACA 160 ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| Sbjct 174775 CGATGAAATTTCAAAGATTACCCGGGCCTGTCGGCCAAGGCTATAGACTCGTTGAATACA 174716 Query 161 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 220 | |||||||| |||||||||| || |||||||||||| || ||||| |||||||||||| Sbjct 174715 TTAGTGTAGCACGCGTGCGGCTCAAAACATCTAAGGGAATTGCAGACTTGTTATTGCCTC 174656 Query 221 AAACTTCC 228 |||||||| Sbjct 174655 AAACTTCC 174648 >seq9 Length=962545 Score = 86.0 bits (94), Expect = 9e-15 Identities = 54/56 (96%), Gaps = 2/56 (4%) Strand=Plus/Plus Query 12 AGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCGTTG 67 |||||||||||||||||||||| |||||||||||||||||||||| |||||||||| Sbjct 33287 AGGGACGTAGTCAACGCGAGCT-GATGACTCGCGCTTACTAGGAA-TTCCTCGTTG 33340 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751796056425