Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ficus_20carica_20[genbank_20GCA_5F002002945.1_202017-01-27] 27,995 sequences; 247,090,738 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq1093 205 2e-50 seq782 167 5e-39 seq22943 154 3e-35 seq102 154 3e-35 seq6837 150 4e-34 seq1191 131 4e-28 seq258 123 5e-26 seq838 105 1e-20 seq39 104 5e-20 seq1984 86.0 1e-14 seq241 78.8 2e-12 seq17 73.4 8e-11 >seq1093 Length=54982 Score = 205 bits (226), Expect = 2e-50 Identities = 226/299 (76%), Gaps = 8/299 (3%) Strand=Plus/Minus Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120 || ||||||||||||||| || |||||||||||||||||||||||||| | ||| ||||| Sbjct 28713 ATTGTTACGCCTTTCGTGTGGATCGGAACTTACCCGACAAGGAATTTCTCGACCATAGGA 28654 Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTA-- 178 || ||||||||||||||||| || ||| ||||| |||| ||| | | | || Sbjct 28653 CCATTATAGTTACGGCCGCCATTCACTAAGGCTTCAGTTGCTGGCTCCCCTGTCATTAGG 28594 Query 179 --ACAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGC 236 || | |||| ||||| | |||| || ||||| | | | || |||||| ||||| Sbjct 28593 TCACCAACTTCCTTGACCTTTCGGCACTGGACAGGCATTAACCCCCATACATGGTCTTAT 28534 Query 237 GACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCG---GC 293 ||||| || || || ||||||||||||||||| || || | ||||| || || || | Sbjct 28533 GACTTTGCGGAGACTTGTGTTTTTGGTAAACAATCACTCGAGCCTAGTCACTACGTCCCC 28474 Query 294 CTGTCATAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 || | || | |||||||||||| | |||||||| | | ||||||| |||||||||| Sbjct 28473 CTTTGTGAG-GAAGCACCCCTTCTCTCGAAGTTACGAGATTATTTTGCTGAGTTCCTTA 28416 >seq782 Length=84039 Score = 167 bits (184), Expect = 5e-39 Identities = 193/258 (75%), Gaps = 8/258 (3%) Strand=Plus/Plus Query 102 GAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCA 161 ||||||| ||||||||||| |||||||||||||||| ||||| | ||||||| || Sbjct 36178 GAATTTCACTACCTTAGGATCGTTATAGTTACGGCCACCGTTCATCGGGGCTTCGGTCGC 36237 Query 162 CTGCTTCGATTGCTCTA----ACAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAG 217 | ||| | | | | || | |||| ||||||| |||| ||||| |||| || Sbjct 36238 CGGCTCCCCTATCATCAGGCCACCAACTTCCTTGACCTTCCGGCACTGGGCAAGCGTTAG 36297 Query 218 CTCCTATACATCGTCTTGCGACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGG 277 | || |||||| ||||| |||||| | || ||||||| ||||||| ||||||| | ||| Sbjct 36298 CCCCCATACATGGTCTTACGACTTTTCGGAGACCTGTGCTTTTGGTGAACAGTCACCTGG 36357 Query 278 GCCTATTCTCTGCGGCC---TGTCATAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTC 334 |||| | || | || | | || ||||||| |||||||| |||||||||||| Sbjct 36358 GCCTGGCCACTATGACCCCCTTTGTGAGG-AGGCACCTCTTCTCCCGAAGTTACGGGGTT 36416 Query 335 ATTTTGCCGAGTTCCTTA 352 |||||||||||||||||| Sbjct 36417 ATTTTGCCGAGTTCCTTA 36434 Score = 77.0 bits (84), Expect = 7e-12 Identities = 83/108 (77%), Gaps = 4/108 (4%) Strand=Plus/Plus Query 238 ACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCC--- 294 |||| || || |||||| ||||||||||||| | | ||||| || || ||| | || Sbjct 39850 ACTTTGCGGAGACCTGTATTTTTGGTAAACAATTGTTTGGGTCTGGTCACTGTGACCCCC 39909 Query 295 TGTCATAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCC 342 | | || |||||||||||||||| ||||||||||| |||||||| Sbjct 39910 TTTGTGAGG-AGGCACCCCTTCTCCCAAAGTTACGGGGCTATTTTGCC 39956 >seq22943 Length=608 Score = 154 bits (170), Expect = 3e-35 Identities = 196/270 (73%), Gaps = 20/270 (7%) Strand=Plus/Minus Query 107 TCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCT 166 || ||||||||||| |||| |||||| ||||||||||||||||||| |||| ||| Sbjct 608 TCACTACCTTAGGATAGTTAGAGTTACTACCGCCGTTTACTGGGGCTTCCATTCAAAGCT 549 Query 167 TCGATTGCTCTAACAGATCCCCTTA--ACCTTCCAGCACCGGGCAGGCGTCAGCTCCTAT 224 | ||||| || |||| ||||||||||| || ||||| ||||| |||| Sbjct 548 TA--------TAACACTTCTCCTTCCGACCTTCCAGCATCGAGCAGGTGTCAGACTCTAT 497 Query 225 ACATCGTCTTGCGACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATT 284 ||| ||| || | |||||||||| ||||||||||| |||||||| || ||| | Sbjct 496 ACACCGTGTTACCACTTAGCAGAGTCCTGTGTTTTTAATAAACAGTAACTACACCCTGGT 437 Query 285 CTCTGCGGCCT------GTCATAGACAG----GCACCCCTTCTCCCTAAGTTACGGGGTC 334 | ||| | | | | ||| || |||||||||||||| ||||||| ||||| Sbjct 436 ATGTGCCACTTTCCTAAGAAAAAGATAGGAGAGCACCCCTTCTCCCAAAGTTACAGGGTC 377 Query 335 ATTTTGCCGAGTTCCTTAACAATAGTTCTC 364 ||||||||||||||||| || |||||| Sbjct 376 ATTTTGCCGAGTTCCTTCGACATGGTTCTC 347 >seq102 Length=349948 Score = 154 bits (170), Expect = 3e-35 Identities = 111/128 (87%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 8 CATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTA 67 ||||||||| | || ||||||| ||| || | |||||||||||||| ||||||| Sbjct 210245 CATCTTCACAGACATGTGTATTTCACTGAGCCTCTCTCTGAGACAGTGCCCAGATCGTTA 210304 Query 68 CGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTAT 127 ||||||| |||| |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 210305 CGCCTTTAGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCAACCTTAGGACCGTTAT 210364 Query 128 AGTTACGG 135 |||||||| Sbjct 210365 AGTTACGG 210372 >seq6837 Length=1256 Score = 150 bits (166), Expect = 4e-34 Identities = 122/148 (82%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 ||||||| || | || | ||||||| ||| || | |||||||||||| ||||| Sbjct 182 GCATCTTTACAGATATGTCTATTTCACTGAGCCTCTCTCCAAGACAGTGCCCAGGTCGTT 123 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 || |||| |||||||||||||||||| ||||||||||||||||||||| | ||||||||| Sbjct 122 ACACCTTCCGTGCGGGTCGGAACTTATCCGACAAGGAATTTCGCTACCATTGGACCGTTA 63 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTT 154 |||||| |||| | ||| |||||||||| Sbjct 62 TAGTTATGGCCACTGTTCACTGGGGCTT 35 >seq1191 Length=46946 Score = 131 bits (144), Expect = 4e-28 Identities = 156/207 (75%), Gaps = 5/207 (2%) Strand=Plus/Minus Query 74 TCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTAC 133 ||||| |||| |||||| ||| |||||||||||| |||| ||||| ||| ||||||| || Sbjct 31458 TCGTGTGGGTTGGAACTCACCTGACAAGGAATTTGGCTATCTTAGAACCATTATAGTCAC 31399 Query 134 GGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGAT-TGCTCTAA-CA-GATCCCCTT 190 ||||| ||| | |||||||| || | || | | | || || || | | |||| Sbjct 31398 AGCCGCTGTTCATAGGGGCTTAGGTCGTCGGCCCCCCTGTCATCAAATCACCAACTCCTT 31339 Query 191 AACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGAAAC 250 ||||| ||||||| |||||| ||| | ||||| ||||| |||||| |||||||| Sbjct 31338 GACCTTTTGGCACCGGATAGGCGTTAGCCCTCTTACATGGTCTTACGACTTTGCAGAAAC 31279 Query 251 CTGTGTTTTTGGTAAACAGTCGCTTGG 277 ||||||||||||| ||||| || || Sbjct 31278 --GTGTTTTTGGTAATCAGTCACTCGG 31254 >seq258 Length=213163 Score = 123 bits (136), Expect = 5e-26 Identities = 113/141 (80%), Gaps = 4/141 (3%) Strand=Plus/Plus Query 187 CCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAG 246 |||| ||||||| |||| ||||||| |||||| || |||||| ||||| | |||| || | Sbjct 50584 CCTTGACCTTCCGGCACTGGGCAGGTGTCAGCCCCCATACATGGTCTTACTACTTTGCGG 50643 Query 247 AAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCG---GCCTGTCATAGA 303 | ||||||||||||||||||||||||| |||||| || ||||| ||| | || Sbjct 50644 AGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGATCACTGCGACCCCCTTTGTGAG- 50702 Query 304 CAGGCACCCCTTCTCCCTAAG 324 |||||||||||||||| ||| Sbjct 50703 GAGGCACCCCTTCTCCCAAAG 50723 >seq838 Length=77650 Score = 105 bits (116), Expect = 1e-20 Identities = 78/91 (86%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 28 TTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTACGCCTTTCGTGCGGGTCGGA 87 |||||||||| || | ||||||||| ||| ||||||||||||||||||| || ||| Sbjct 47288 TTTCACCGAGCCTCTCTCCGAGACAGTGTCCACATCGTTACGCCTTTCGTGCAAGTTGGA 47347 Query 88 ACTTACCCGACAAGGAATTTCGCTACCTTAG 118 |||||||||| |||||||||||||| ||||| Sbjct 47348 ACTTACCCGATAAGGAATTTCGCTATCTTAG 47378 >seq39 Length=548529 Score = 104 bits (114), Expect = 5e-20 Identities = 75/87 (86%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 68 CGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTAT 127 ||||||||||| |||||| ||||||||| |||| ||||||| |||||||||| | ||||| Sbjct 42159 CGCCTTTCGTGTGGGTCGAAACTTACCCAACAAAGAATTTCACTACCTTAGGCCTGTTAT 42218 Query 128 AGTTACGGCCGCCGTTTACTGGGGCTT 154 ||||| ||||||| || || | ||||| Sbjct 42219 AGTTATGGCCGCCATTCACCGAGGCTT 42245 >seq1984 Length=12187 Score = 86.0 bits (94), Expect = 1e-14 Identities = 124/172 (72%), Gaps = 5/172 (3%) Strand=Plus/Plus Query 187 CCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAG 246 || |||| ||| ||| || ||| |||| | || |||||| | ||| |||||| | | Sbjct 790 CCCTAACTTTCTGACACTAGGTAGGTGTCAACCCCCATACATGGCCTTACGACTTTGTAA 849 Query 247 AAACCTGTGTTTTTG---GTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTCATA-G 302 | | |||||||||| ||||||| ||| |||| ||| || || | || | || | Sbjct 850 AGATCTGTGTTTTTTTTTGTAAACAATCGTATGGGACTAGTCATTGTGACCCCTTTTATG 909 Query 303 AC-AGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAA 353 | |||||||||||||||| ||||||| ||| ||||| | ||||||| || Sbjct 910 AGGAGGCACCCCTTCTCCCAAAGTTACAAGGTTATTTTATCAAGTTCCTAAA 961 >seq241 Length=220789 Score = 78.8 bits (86), Expect = 2e-12 Identities = 70/86 (81%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 270 TCGCTTGGGCCTATTCTCTGCGGCC---TGTCATAGACAGGCACCCCTTCTCCCTAAGTT 326 |||| || |||| || ||||| || | ||| || |||||||||||||||| ||||| Sbjct 49426 TCGCCCGGACCTAGTCACTGCGACCCCCTTTCAGAGG-AGGCACCCCTTCTCCCGAAGTT 49484 Query 327 ACGGGGTCATTTTGCCGAGTTCCTTA 352 ||||| | |||||||||||||||||| Sbjct 49485 ACGGGATTATTTTGCCGAGTTCCTTA 49510 >seq17 Length=748135 Score = 73.4 bits (80), Expect = 8e-11 Identities = 63/78 (81%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 48 AGACAGTGCCCAAATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTT 107 ||||| |||||| || |||| || ||| | | ||| ||||||||||| ||||| ||||| Sbjct 520284 AGACAATGCCCATATTGTTAAGCTTTTTGGGTAGGTTGGAACTTACCCAACAAGAAATTT 520343 Query 108 CGCTACCTTAGGACCGTT 125 ||||| ||||||| ||| Sbjct 520344 CGCTATATTAGGACAGTT 520361 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062102581120