Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ficus_20carica_20[genbank_20GCA_5F002002945.1_202017-01-27] 27,995 sequences; 247,090,738 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq767 93.3 2e-16 seq23772 84.2 8e-14 seq692 82.4 3e-13 >seq767 Length=85513 Score = 93.3 bits (102), Expect = 2e-16 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 137 GCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCAC 196 ||| | ||| ||||||||| | |||||||||||| | | | ||| || ||||||||||| Sbjct 77340 GCTACGCCTCAATGCATTTTGATGAGAACCAGCTAGCTCTAGGTTCGAGTGGCCTTTCAC 77399 Query 197 CCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGT 256 ||||| ||||| ||||| || | | |||||| | | |||| ||||||| || Sbjct 77400 CCCTAACCACAACTCATCTGCTGATTCTTCAACATCAACCAGTTCATACCTCCACTTAGT 77459 Query 257 CTTACCCGCGCTTCAACCTGCCCATGGAT 285 | |||| |||||| |||| ||||||| Sbjct 77460 TTCACCCAAGCTTCATCCTGGTCATGGAT 77488 >seq23772 Length=588 Score = 84.2 bits (92), Expect = 8e-14 Identities = 101/135 (75%), Gaps = 3/135 (2%) Strand=Plus/Plus Query 445 CAGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTC--ACTCCCCGCCAGGGG 502 || || |||| |||||| ||| | | ||| || || | || |||||| ||| Sbjct 100 CACCTTCGACTGATTGTTCGCATCGGATCTCAAGTTCTCTATCGCACTCCCTAAATAGGG 159 Query 503 TACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGC 562 | |||||| ||||||||||||||||||||| | |||||||||| |||| | |||||| Sbjct 160 TTCTTTTCGCCTTTCCCTCACGGTACTTGTACACTATCGGTCATTGAGGA-AACTTAGGC 218 Query 563 TTAACGGGTGGTCCC 577 |||| |||||| ||| Sbjct 219 TTAAAGGGTGGGCCC 233 >seq692 Length=96769 Score = 82.4 bits (90), Expect = 3e-13 Identities = 116/163 (71%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 143 CCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTAT 202 ||| || |||||||||| | ||||| ||| | | ||| || |||| ||||||||||| Sbjct 66924 CCTCAACGCATTTCGGGTAAAACCAACTAGCTCTGGGTTCGAGTGGCATTTCACCCCTAA 66983 Query 203 CCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACC 262 ||||| ||||| || | | || | | | | | ||||||| ||||||| || | ||| Sbjct 66984 CCACAACTCATCTTCTGATTCTTTAGCATCATTTGGTTCGGACCTCCACTTAGTTTCACC 67043 Query 263 CGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTC 305 | |||| | | | |||||||| ||||| | ||||| || Sbjct 67044 CAAGCTTTATCTAGGTCATGGATACATCACCCAGGTTCGGTTC 67086 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817091162880