Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ficus_20carica_20[genbank_20GCA_5F002002945.1_202017-01-27] 27,995 sequences; 247,090,738 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq587 77.0 8e-12 seq3652 75.2 3e-11 >seq587 Length=114292 Score = 77.0 bits (84), Expect = 8e-12 Identities = 57/67 (85%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 259 CTTGACCAGTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTG 318 || || ||||||||||||||||||||||| || | ||||| |||| | || ||||||||| Sbjct 65125 CTCGATCAGTGAGCTATTACGCACTCTTTGAAAGGTGGCTACTTCTAGGCAAACCTCCTG 65184 Query 319 GTTGTCT 325 | ||||| Sbjct 65185 GCTGTCT 65191 >seq3652 Length=1486 Score = 75.2 bits (82), Expect = 3e-11 Identities = 80/106 (75%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 293 ATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTGA 352 ||||||||||| | | || | ||||| ||| | | | | || |||||| |||||| Sbjct 1366 ATGGCTGCTTCTAGGTAAATTTTTTGGTTATCTCTGTATCCCTACCTCCTTTATCACTGA 1307 Query 353 GTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCT 398 || | | |||||||||||||||| ||||| ||| |||||| |||| Sbjct 1306 GTGATTATTTAGGGGCCTTAGCTGGTGATCCGGGTTGTTTCTCTCT 1261 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177270330880