Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ficus_20carica_20[genbank_20GCA_5F002002945.1_202017-01-27] 27,995 sequences; 247,090,738 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq285 178 2e-42 seq9 80.6 5e-13 >seq285 Length=201032 Score = 178 bits (196), Expect = 2e-42 Identities = 151/185 (82%), Gaps = 1/185 (1%) Strand=Plus/Plus Query 103 GGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGC 162 |||||||||||||||||||| ||||| || |||||||||||| || |||||||||| || Sbjct 174648 GGAAGTTTGAGGCAATAACAAGTCTGCAATTCCCTTAGATGTTTTGAGCCGCACGCGTGC 174707 Query 163 TACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAA 222 |||||| | | |||||||| || ||||||||| ||| | |||||||||| | || Sbjct 174708 TACACTAATGTATTCAACGAGTCTATAGCCTTGGCCGACAGGCCCGGGTAATCTT-TGAA 174766 Query 223 ACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGT 282 | | ||||| ||||||||| |||||||||| ||| |||||||| |||||| |||||| Sbjct 174767 ATTTCATCGTGATGGGGATAGGTCATTGCAATTGTTGGTCTTCAACTAGGAATTCCTAGT 174826 Query 283 AAGCG 287 ||||| Sbjct 174827 AAGCG 174831 >seq9 Length=962545 Score = 80.6 bits (88), Expect = 5e-13 Identities = 50/54 (93%), Gaps = 0/54 (0%) Strand=Plus/Minus Query 265 CAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318 ||||||||||| ||||||||||||| ||||||||| |||||||| ||||||||| Sbjct 33340 CAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGACTACGTCCCT 33287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 946934831360