Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ficus_20carica_20[genbank_20GCA_5F002002945.1_202017-01-27] 27,995 sequences; 247,090,738 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq871 563 3e-158 seq73 389 1e-105 seq286 125 2e-26 >seq871 Length=75021 Score = 563 bits (624), Expect = 3e-158 Identities = 448/534 (84%), Gaps = 7/534 (1%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| || ||| ||||||| ||||||| |||| | ||||||| || ||| |||| Sbjct 34307 CTTTTGTTCAACATGAGATTTTTGTTCTCATTGAGCTCATCTTAGGATACATGCTTTATC 34248 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||| || ||||||||||||||||||||| | || ||| ||| Sbjct 34247 CTTTAACAGATGTGCCGCCACAACCAAACTCCCCACCTGACAATAGCTTCCGCCCAGATT 34188 Query 127 GGCCCGCGAAGGA---CCTTAACGCCAGAAAATGGTCGGTGAAGACC-AGTTCCGCTTCA 182 |||| || ||| |||| ||| ||| || || | | || | |||| |||| Sbjct 34187 GGCCTGCCGAGGCATGCCTTGGGTCCAAAAAGAGG--GGCAATGCCCCACCTCCGATTCA 34130 Query 183 TTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGG-CTCCC 241 || ||||||||| || | ||| ||||||||||||||||| ||| | | | ||||| Sbjct 34129 CAGAATAAGTAAAATAATGTTAAAAGTAGTGGTATTTCACTTTCGCTGTTTCCGACTCCC 34070 Query 242 ACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGG 301 |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 34069 ACTTATACTACACCTCTCAAGTCATTTTACAAAGTCGGACTAGAGTCAAGCTCAACAGGG 34010 Query 302 TCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGT 361 ||||||||||||| ||||| |||||||||||||||||||||||||||||| | ||||| Sbjct 34009 TCTTCTTTCCCCGTTGATTATGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGTTGAATAGT 33950 Query 362 AGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAG 421 ||| ||||||||||||||| ||||||||| |||||||| |||||||||||||||||| || Sbjct 33949 AGACAGGGACAGTGGGAATTTCGTTAATCTATTCATGCTCGTCACTAATTAGATGACAAG 33890 Query 422 GCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAA 481 |||||||||||||||||||||| |||||||||||| | ||||||||| |||||||||||| Sbjct 33889 GCATTTGGCTACCTTAAGAGAGCCATAGTTACTCCTGTCGTTTACCCACGCTTGGTTGAA 33830 Query 482 TTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535 ||||||||||||||||||||||||| |||| ||||||||||| ||| | |||| Sbjct 33829 TTTCTTCACTTTGACATTCAGAGCATTGGGGGGAAATCACATTCCGTGATCATC 33776 >seq73 Length=429014 Score = 389 bits (430), Expect = 1e-105 Identities = 264/295 (89%), Gaps = 1/295 (0%) Strand=Plus/Minus Query 189 AAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAAC-GGCTCCCACTTAT 247 || ||||| |||| ||| ||||||||||||||||| | ||| | ||||||||||||| Sbjct 41937 AATTAAAATAACGTTAAAAGTAGTGGTATTTCACTTTCTCCGTTTCCGGCTCCCACTTAT 41878 Query 248 TCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCT 307 |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| Sbjct 41877 ACTACACCTCTCAAGTCATTTCACAAATTCGGACTAGAGTCAAGCTTAACAGGGTCTTCT 41818 Query 308 TTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAG 367 ||| | |||||||| | ||||||| || |||||||||||||||||||||| ||||||| | Sbjct 41817 TTCTCTGCTGATTCTGTCAAGCCCATTACCTTGGCTGTGGTTTCGCTAGACAGTAGATTG 41758 Query 368 GGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTT 427 |||| |||||||||| ||||| ||||||||||||| |||||||||||||||||||||||| Sbjct 41757 GGACGGTGGGAATCTGGTTAACCCATTCATGCGCGCCACTAATTAGATGACGAGGCATTT 41698 Query 428 GGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAAT 482 |||||||||| |||||||||||||| ||||| |||||| ||| |||||||||||| Sbjct 41697 GGCTACCTTAGGAGAGTCATAGTTATTCCCGTCGTTTATCCGGGCTTGGTTGAAT 41643 >seq286 Length=200442 Score = 125 bits (138), Expect = 2e-26 Identities = 104/127 (82%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| || || |||| | ||||||| |||| | |||||||||| |||||||| Sbjct 188713 CTTTTGTTCCGCACGAGAAATATGTTCTCTTTGAGCTCATCTTAGGACACATGCGTTATC 188654 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||| | | | |||||||||||||||||||||||||| || |||||||| Sbjct 188653 TTTTAACAGATGTGTCACTCTAGCCAAACTCCCCACCTGACAATGTCTTCTGCCCGGATC 188594 Query 127 GGCCCGC 133 ||||||| Sbjct 188593 GGCCCGC 188587 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634742225760