Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ficus_20carica_20[genbank_20GCA_5F002002945.1_202017-01-27] 27,995 sequences; 247,090,738 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq318 77.0 7e-12 >seq318 Length=187033 Score = 77.0 bits (84), Expect = 7e-12 Identities = 115/162 (71%), Gaps = 6/162 (4%) Strand=Plus/Minus Query 145 CCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCC 204 |||||| |||| ||||| |||||||||| ||||| ||||| | |||||||||||| | Sbjct 86138 CCATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCCGAGCCGTGTCTCAGTCCT 86079 Query 205 AATGTGGGGGACCTTCCTCTCAGAACCC---CTATCCATCGTAGGCTAGGTGGGCCGTTA 261 | ||||| || || ||| | || | ||| |||| | |||| ||| ||| ||| Sbjct 86078 AGTGTGGTTGA---TCATCTGAAAAGACTAGCTAAGCATCATTGGCTTGGTCAGCCTTTA 86022 Query 262 CCCCGCCTACTACCTAATGGAACGCATCCCCATCGTACACCG 303 || || || ||||||| ||||| | |||| ||| || Sbjct 86021 CCTAACCAACAACCTAATACTACGCAGGCTCATCAAACAACG 85980 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068500789440