Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20iinumae_20[genbank_20GCA_5F000511975.1_202013-12-06] 117,822 sequences; 199,627,509 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq26775 185 1e-44 >seq26775 Length=432 Score = 185 bits (204), Expect = 1e-44 Identities = 190/240 (79%), Gaps = 10/240 (4%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| || |||| |||| |||||||| ||| ||||||||||| | Sbjct 408 GTACAAAGGGCAGGGACGTAATCGACGCAAGCT-GATGACTCACGCCTACTAGGAATT-C 351 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | || ||||||||| | ||||||||||||| | |||| || || Sbjct 350 CTCGTTCATGGGGAATAATTGCAATCCCCAATCCCCATCACGAAGGGGGTTCAGAGGGTT 291 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||| |||| || || | || | ||| | |||||||||||||||||| Sbjct 290 TCCCGATCCTTTCGGACAGGGA---ACACATGCTGATCCCTTCAGTGTAGCGCGCGTGCA 234 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG-GCCTAAA 238 ||||||||||||||||||||||||||||||||||||| ||||| || |||| | ||||| Sbjct 233 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT--CGTGCGGCTAAA 177 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751141666730