Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20iinumae_20[genbank_20GCA_5F000511975.1_202013-12-06] 117,822 sequences; 199,627,509 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq56964 105 3e-21 seq103376 77.0 1e-12 >seq56964 Length=746 Score = 105 bits (116), Expect = 3e-21 Identities = 72/80 (90%), Gaps = 1/80 (1%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| |||||||||| |||||||||||| ||| |||||||||||||||| Sbjct 663 GGAAAAGAAACTAACAAGGATTCCCTTAGTAACGGCGAGCGAAAAGGGAAGAGCCCAGCG 604 Query 61 CCGAATC-CCCGCCCCGCGG 79 ||||||| | ||||| ||| Sbjct 603 CCGAATCTCATGCCCCCCGG 584 >seq103376 Length=531 Score = 77.0 bits (84), Expect = 1e-12 Identities = 53/59 (90%), Gaps = 1/59 (2%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||||||||| || |||||||||| |||||||||||| |||| ||||| |||||||| Sbjct 146 GGAAAAGAAACTTACAAGGATTCCCTTAGTAACGGCGAGCGAAC-GGGAACAGCCCAGC 89 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230145504480