Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fragaria_20iinumae_20[genbank_20GCA_5F000511975.1_202013-12-06]
117,822 sequences; 199,627,509 total letters
Query= AAMG01000811.1
Length=502
Score E
Sequences producing significant alignments: (Bits) Value
seq68810 125 2e-26
seq79437 98.7 3e-18
>seq68810
Length=6058
Score = 125 bits (138), Expect = 2e-26
Identities = 92/107 (86%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60
|||| || ||| |||||||||||||||||||| ||| ||||||||| ||||||||||
Sbjct 5842 TACGTTCGAAAGAATGAAACTCAAAGGAATTGACAGGGGCCCGCACAAATGGTGGAGCAT 5901
Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACAT 107
|||||||||||||| |||| ||||||||||||||| ||||||||
Sbjct 5902 GTGGTTTAATTCGATGCAAAACGAAGAACCTTACCAGGGCTTGACAT 5948
>seq79437
Length=18409
Score = 98.7 bits (108), Expect = 3e-18
Identities = 71/82 (87%), Gaps = 0/82 (0%)
Strand=Plus/Minus
Query 156 ACAGGTGATGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAAC 215
||||||| ||||||| ||||||||||| ||| | | || |||||||||||||||| ||||
Sbjct 11080 ACAGGTGGTGCATGGCTGTCGTCAGCTTGTGCCATAAGGTGTTGGGTTAAGTCCCACAAC 11021
Query 216 GAGCGCAACCCTTAAGCTTAGT 237
||||||||||||| | |||||
Sbjct 11020 GAGCGCAACCCTTGTGTTTAGT 10999
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1502227957120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |