Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fragaria_20iinumae_20[genbank_20GCA_5F000511975.1_202013-12-06]
117,822 sequences; 199,627,509 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq96547 104 2e-20
seq56214 95.1 1e-17
>seq96547
Length=10798
Score = 104 bits (114), Expect = 2e-20
Identities = 134/181 (74%), Gaps = 3/181 (2%)
Strand=Plus/Minus
Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69
|| ||| |||||| ||||||||| ||||| |||| || | ||| | |||||||| |||
Sbjct 622 CTATTAGTTTGAAGAAATTAGAGTGTTCAGAGCAAGCTTACCCTCTGGATACATTAGCAT 563
Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129
|| |||| | ||||| | | |||| |||| || || | ||| || |||||||
Sbjct 562 GGGATAACATCATAGG-CTTTCGGTCATATTGCGTTGGCCTTCGGGATCGGA-GTAATGA 505
Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189
| || | ||| ||||||||| | ||||| || |||| | ||||||||||||||||||
Sbjct 504 TTAACAAGGACAGTCGGGGGCATTTGTATTTCATAGTCAGAAGTGAAATTCTTGGATTTA 445
Query 190 T 190
|
Sbjct 444 T 444
>seq56214
Length=1414
Score = 95.1 bits (104), Expect = 1e-17
Identities = 132/180 (73%), Gaps = 4/180 (2%)
Strand=Plus/Plus
Query 5 CCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC-CT-TTGCTCGAATACA 62
|||| || ||||||||||||||||| ||| | ||||||||||| || || ||| |
Sbjct 1237 CCAGCACGTTTACTTTGAAAAAATTGGAGTGCTCAAAGCAGGCGCTACAGCCTGAACATT 1296
Query 63 TTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCC 122
| ||||||||||| |||||||| | ||||||||||| || || || | |||
Sbjct 1297 TGTGCATGGAATAATGGAATAGGATCT-CGGTTCTATTTCGTTGGCTT-TCGGAGTCGAG 1354
Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182
|||||||| |||| ||| || |||||| | ||| | || | |||||||||||||
Sbjct 1355 GTAATGATTAATAGGGACAGACGGGGGCATTCGTACTGCGACGTTAGAGGTGAAATTCTT 1414
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511415602880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |