Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fragaria_20iinumae_20[genbank_20GCA_5F000511975.1_202013-12-06]
117,822 sequences; 199,627,509 total letters
Query= AAMG01002180.1
Length=500
Score E
Sequences producing significant alignments: (Bits) Value
seq810 237 5e-60
>seq810
Length=5265
Score = 237 bits (262), Expect = 5e-60
Identities = 223/282 (79%), Gaps = 3/282 (1%)
Strand=Plus/Minus
Query 222 GAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCA 281
|||||| ||||| |||||| ||| |||||||||| | ||| |||||||| ||||||||||
Sbjct 2757 GAGAGGATGATCAGCCACACTGGGACTGAGACACTGCCCAGACTCCTACAGGAGGCAGCA 2698
Query 282 GTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAG 341
||||||||| || | |||||||||||||||| | | ||||| |||||||| | ||||
Sbjct 2697 GTGGGGAATTTTCCGCAATGGGCAAAAGCCTAACGGAGCAATGCCGCGTGTAGGTAGAAG 2638
Query 342 GCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA--TAATGACGGTACTTGAGGAGGAA 399
|||| || ||| | || ||| | | ||| ||||| ||||||| ||| || ||| ||
Sbjct 2637 GCCTACGAGTCATGAACTTCTTTTCCCAAAGAAGAAGTAATGACTGTATATGGGGAATAA 2578
Query 400 GCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGA 459
|| ||||||||| |||| ||||||||||||||||| ||| || |||||||||||||
Sbjct 2577 GCATCGGCTAACTTTGTGCTAGCAGCCGCGGTAATACAGAGGATGCAAGCGTTATCCGGA 2518
Query 460 ATTA-CTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500
| | | ||||||||| || |||||||| || |||||||
Sbjct 2517 ACGAGATTGGGCGTAAAACGTATGTAGGTGGCTTTTTAAGTC 2476
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1495835497728
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |